KEGG T02918: 102131983

Macaca fascicularis (crab-eating macaque): 102131983

Entry

102131983         CDS       T02918

Symbol

CPSF4

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

mcf Macaca fascicularis (crab-eating macaque)

Pathway

mcf03015

mRNA surveillance pathway

mcf05164

Influenza A

Brite

KEGG Orthology (KO) [BR:mcf00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102131983 (CPSF4)
09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102131983 (CPSF4)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcf03021]
    102131983 (CPSF4)
   03019 Messenger RNA biogenesis [BR:mcf03019]
    102131983 (CPSF4)
Transcription machinery [BR:mcf03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102131983 (CPSF4)
Messenger RNA biogenesis [BR:mcf03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102131983 (CPSF4)

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 zf-CCCH_3 Torus zf-CCCH_2 zf-CCCH_12 zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L zf-C3H1 zf-CCHC_3 Nab2-like_zf-CCCH_

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

3:join(48027087..48027189,48033124..48033174,48036365..48036517,48038508..48038603,48038958..48039051,48041027..48041099,48042643..48042813,48044781..48044849)

AA seq 269 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ

NT seq 810 nt +upstreamnt +downstreamnt
atgcaggaaataatcgccagcgtggaccacatcaagtttgacttggagatcgcagtggag
cagcagctcggggcgcagccgctgcccttccccggcatggacaagtcgggtgctgctgtc
tgtgaattctttttgaaagctgcctgcggcaaagggggcatgtgtccgtttcgccacatc
agcggtgagaagacagttgtgtgcaaacactggctgcgtggcctatgcaagaaaggggac
cagtgcgagttcctgcatgagtatgacatgaccaagatgcccgagtgctacttctactcc
aagttcggagagtgcagcaacaaggagtgtcccttcctgcacatcgaccccgagtccaag
atcaaggactgcccttggtatgaccgcggcttctgcaagcacggtcccctctgcaggcac
cggcacacacggagagtcatctgtgtgaattacctcgtgggattctgcccagaggggccc
tcatgtaaattcatgcaccctcgatttgaactgcccatgggaaccaccgagcagccccca
ctgccgcagcagacccagcctccggcaaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaatcagcagagaaccccacag
gtcatcggggtcatgcagagtcaaaacagcagcgcgggcaaccggggaccccggccactg
gagcaggtcacctgttacaagtgtggcgagaaaggacactacgccaacagatgcaccaaa
gggcacttggcctttctcagtggacagtga

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