KEGG   Macaca fascicularis (crab-eating macaque): 102132380
Entry
102132380         CDS       T02918                                 
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
  KO
K10484  structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    102132380 (SLX4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcf04121]
    102132380 (SLX4)
   03400 DNA repair and recombination proteins [BR:mcf03400]
    102132380 (SLX4)
Ubiquitin system [BR:mcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     102132380 (SLX4)
DNA repair and recombination proteins [BR:mcf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     102132380 (SLX4)
SSDB
Motif
Pfam: Slx4 BTB
Other DBs
NCBI-GeneID: 102132380
NCBI-ProteinID: XP_005591147
Ensembl: ENSMFAG00000043878
LinkDB
Position
20:complement(join(4362634..4362988,4363378..4363797,4365059..4365161,4369187..4371483,4372881..4373047,4374632..4374778,4375791..4375879,4376362..4376593,4377856..4378172,4378274..4378470,4381380..4381592,4382492..4382681,4385777..4386001,4388042..4388447))
AA seq 1785 aa
MDESDDDFKELCASFFQRVKKHGIKEVSGERKTQNASSNGTQVRRKLKRTKQTATKTKTL
QGPAEKKPPSGSQAPRTKKQGVTKWQASEPALSVNGEAGVLASAPDQPVLWETAQNTQTG
NRQEPSPNLSKEETTENAPNSNSQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPER
LRHASEECSLEAAQEENVPKDPQEEMMARNVFGLGPPAPESDAAVALTLQQEFARVGASA
HDDSLEEKGLFFCQICQKNLSAMNVTRREQHVNRCLDEAEKALRPSVPQIPECPICGKPF
LTLKNRASHLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSLPVSSDHGGGLKRRGPASKK
EPRKRRKVDEAPSEDLLVAMALSRSEMEPCAAVPALRLESAFSERIKPEAEKKSRKKKPP
VSPPLLLVQDSETTGRQIEDRVALLLSEEVELSSTPPLPASRILKEGWERAGQCPPPPEC
KQSFLWEGSALTGAWATEAFYTARLVPPLVPQRPAQGLMQEPVLPLVPPEHSERRSPALH
GTPPAGCGSRGPSPSASQREQQALQDLVDLAREGLSASPWPSSGGLAGSEGAAGLDVVPG
GLPLTGFVVPSQDKHPERGGRTSLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKF
VLYARCPLLIQYVNNEGFSAVEDGILTQRVLLGDVSTEAACAFLHYLYTADTGLPPGLSS
ELSSLAHRFGVSELVHLCEQVPVTTDSGGKPWEEKEAENCESRAENFQELLRSMWADEEE
EAETLLKSKDHEEDQENVNEAEMEEIYEFAATQRKLLQEEKAVGAGEDADWLEGGSPVSG
QLLASVQVQEQSDKVEEMEPSEPGRDEATTTWEKVGQCPLPPPQGQRSGAWGAEAPEQEA
LGRSSCSTPSRGCRAERKEGPLPHSDGAGDYDQLFSSTQGEVSELSRVTSEPEERSGTVR
ERGLEVSHRLAPWQVSPPHPCRFLLGPPQGRSPRGSHQPHRTSGLPLSTPRSRGGTSQVG
SPTSLSPAVPSKQKRDRSVLTLSKEPGHQKGTERRSMLECRNKGVLMSPEKSLSIDLTQS
NPDHLSSTSQKSPSKVNKDDEVILLLDSDEELELEQTQMKSISSDPLEERKALEISARSC
ELFSVIDVDADQERSHSPPRREAALQREDEGALPENRGSLGSRGAPWLFCDRESSPGEGS
TIDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVEVVTQHTPRASVGNREGNEAAQKFS
VIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHKSPSRPHPGGHPHSSPLAPRPISGDCAHF
SRRFLKHSPPGPSFLNQTTASEVVEVGDSDDEQEVASHQANSSPPLDSDPPIPVDDCCWQ
MEPLSPIPIDHWNLERTGPLSTSSPSRRMKEAADSCDCRSPGLLDTTPIRGSCAARRKSQ
VGAGSPGNSRLSFLNSALWDDWDGEEQRPPETPPLAQMLSVGGAQKPEGLETPKGVHRKK
DLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTVDSDSED
ESQSSQPLLQAPRCQTLASQTYKPSRAGAHAQQEATTGPGTHRPKGPAKTKGPQHQRNHH
ESIAPAPPSRSPTKEAPPGLDDDAQLPASQESVATSVDGSDSSLSSQSSSSCEFGAAFES
AGEEEEGEEEVSASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELGELQAELKQNG
LRVSSRRLLDFLDTHCITFTTAAARREKLQGRRRWPRSKKKAARN
NT seq 5358 nt   +upstreamnt  +downstreamnt
atggatgagtctgatgacgactttaaagaactctgcgctagctttttccaaagggtgaaa
aaacatggaatcaaggaagtgtcaggagaaaggaagacacaaaacgcctcctcaaacggc
actcaggtaagacgcaaattgaaaaggaccaaacaaactgctaccaagaccaaaaccctt
caaggccctgcagagaagaaacctccatctggcagccaggcccctaggactaaaaagcaa
ggggtaaccaaatggcaagcaagtgaaccggccctctctgtgaatggggaggcgggtgtg
ctcgcctctgctccagatcagcctgtgctctgggagacagcacaaaacacccagacgggt
aaccggcaagaaccatcgccaaacctttccaaagaggaaaccacagagaatgcgcctaac
agcaactctcagcctcctccttcctgtttgacaacagcagtgccaagtccctccaaaccc
cgcacagcacaattggtcctacagcgaatgcagcagttcaagagagcagaccccgagcgt
ttgagacatgcttcagaagagtgctccctcgaggctgcacaggaagaaaacgtcccaaag
gatcctcaagaggagatgatggcgaggaatgtgtttgggcttgggccccctgccccagag
agcgacgctgcggtggccttgaccctgcagcaggagtttgcacgggtaggagcatcggca
catgatgatagcctggaggaaaaagggttgttcttctgccagatttgtcaaaagaacctg
tcagccatgaacgtgacccgaagggaacagcatgtaaacaggtgcctggatgaagctgaa
aaggcactaagaccttccgtgcctcagatccctgagtgcccgatttgtgggaaaccattt
ctgaccttaaagaacagagccagccacttgaagcagtgtgctgtgaagatggaggttggc
ccccagctcctgctgcaggccgtccggctgcagacagcacagcctgaggggagcagcagc
ctgccagtgtccagtgatcacggtggaggtctgaaacggagaggacccgccagcaagaag
gagccacggaagaggcggaaggtggacgaggcaccgtccgaggacctgctggtggccatg
gctctgtcccggtcggagatggagccgtgtgcggctgtgccagcgctcaggctggaaagt
gccttttctgagaggataaaaccagaagcagagaagaaaagtcgcaagaagaaaccccca
gtgtctcccccattgttgttagtccaggactctgaaaccacaggccgacagatagaggac
cgtgtggccctgctcctgtctgaggaagtggaattgtctagcacgccaccacttcctgcc
agcaggattttaaaggaagggtgggaaagagcaggccagtgtcctcctccacctgaatgc
aagcagagctttctgtgggagggcagtgccctgactggggcctgggccacggaggccttc
tacacggccaggctggtccctcccctcgtgccccagcggcctgcccagggcctcatgcag
gagcctgtgctgccgctggtgccacctgagcactcagagcgaaggtcacccgctctccac
ggcaccccccctgcaggctgtggctccaggggaccgtcgccttcggccagccagagggag
cagcaggccctgcaggacctcgtggacctggcgagggagggactgagcgccagcccgtgg
cccagcagtgggggcctggctggctcggaaggggccgcagggttggacgtggtgcccggc
ggccttcctctgactgggtttgtggtgccatcgcaggacaagcacccagaaaggggcggc
cgcacctcgctctcccttgggctgctggttgctgactttggtgccatggtcaataaccca
cacctgagtgatgtccagttccagacagacagcggggaggtgctttacgcccacaagttc
gtgctttatgcccgatgcccgctcctcatccagtatgtgaacaacgaaggcttctccgct
gtagaggacgggattctgacccagcgtgtcctgctgggtgacgtgagcactgaggccgcc
tgcgcattcctgcactacctctacaccgcggacactggccttcctcctggcctgagctct
gagctgagttccctggcccacaggtttggtgtgagcgagcttgttcacctgtgcgaacag
gtgcctgtcaccacggactcagggggcaaaccatgggaggagaaggaagccgagaattgc
gaaagcagggccgagaatttccaggaactcttgaggtcaatgtgggcagatgaagaggag
gaagcggagactttgttgaaatccaaggaccacgaagaagatcaagaaaacgtgaatgaa
gcagaaatggaagaaatttatgaattcgcagctactcagcgaaagctgctccaggaagaa
aaagcagtgggtgctggcgaggatgctgactggctggagggtggcagtccggtttctggg
cagctcctagcaagtgtccaggtgcaggaacagtcggacaaggtggaggagatggagccg
tcggagccaggaagagatgaggccaccaccacctgggagaaggtgggacagtgccctctc
ccaccaccccagggccagcgctcaggggcatggggagcagaggcccccgagcaggaggcg
cttggccgttccagttgctccaccccttccaggggctgccgcgcagagagaaaagaaggc
ccccttccgcactcggatggtgccggtgattacgaccagctcttctcatcaactcaggga
gaggtctcagagctgtcccgagtaacaagtgagcctgaggaacgaagtggcactgtcagg
gaaagggggctggaggtttctcatcgcctggctccctggcaggtgtctccaccacacccg
tgccgcttcctactggggcctccccagggcaggagtccccgcgggtctcatcagcctcat
cgcacaagcgggttgcccctgtcaacaccccggtcccgtggcggaacttcccaggtgggc
tccccaacctcgctgtctccagctgtgccatcaaagcagaaaagggacaggagcgtcctc
acgctgtctaaagagccaggccaccagaaaggcacagagcgtcgctccatgctggagtgc
agaaataagggggtcctgatgtccccagaaaaatctctgtccattgacctaacccagtca
aatcctgaccatttgagctccacatctcagaagtctccatccaaagtgaacaaagacgac
gaggtcatcctcttactggactcggatgaggagctagagctagaacaaacccaaatgaag
tccatttctagtgatcctctggaagaaaggaaagctctagaaattagcgctaggtcctgt
gagctgttttccgtcattgacgtcgatgcagatcaggaacgttcccacagcccaccaaga
agggaagctgcgctgcagcgggaggatgagggggcgctgccggagaaccggggctctttg
ggcagcagaggggctccctggctgttctgcgaccgtgagagcagccccggcgagggcagc
accatagacacctcatggctggtgcccgccaccccgctggccagcagaagccgcgactgt
tcttcccagacccaaatcagcagcctcaggagcgggctggccgtggaggtggtgacacag
cacacgcccagggcctcggtaggaaacagggaagggaacgaggctgcacagaagttttcc
gtcatcaggccccagacaccaccgccccagacaccgtcctcctgcctcactcccgtctct
ccaggaacttctgacggcagaaggcaaggccacaaaagcccttcccgtccccaccctggg
ggccacccgcactcctctccgctggctccacgtcccatctcaggggactgtgcccacttc
agcaggcggttcctgaaacactcgccacctgggccaagcttcctgaaccagaccacagcg
agtgaagtggtggaagtcggggacagtgacgatgagcaggaggtggcctcccatcaggcc
aacagcagccccccgctggacagtgaccctccaattccagtcgacgactgctgctggcag
atggagcccctctcgccaattcccattgatcactggaacctggagcggaccggccccctg
agcaccagcagccccagccgcaggatgaaggaggccgccgacagctgtgactgccgctcc
ccgggactcctggacaccacccccatccgaggaagctgcgctgcccggaggaaatcgcaa
gtgggcgcgggttccccggggaacagcaggctgagctttctgaattcggctctgtgggac
gattgggacggggaagagcagaggcctccagagacccctcctctagcgcagatgctaagc
gtcggtggagctcagaagcccgaagggttagagacacccaaaggtgtacatcggaagaag
gacttgcctcccaaagtgcccataacgccgatgccacagtattccattatggagacgccg
gtgctgaagaaggaactggataggtttggagtccgccctctgcctaaacgccagatggtt
ctgaagctgaaggagatattccagtacactcaccagaccgtggactcagactctgaggat
gagagccagtcctcacagccgctactgcaggcgcctcgctgccagaccctcgcctcccag
acctacaagccttcaagggcaggggcccatgcccagcaggaggccaccacaggacctggg
acccataggcccaagggacctgctaagaccaagggcccccaacatcaaaggaatcatcat
gaaagcatcgcacccgcacccccaagcaggtcgcccaccaaggaggcacctccaggcctt
gatgatgatgcccagctcccagcctcccaggaatccgtggccacttctgtggacggcagt
gacagctccttgagctcacagagttcttcctcctgtgagtttggagcggcatttgagtct
gcaggtgaagaggaggagggtgaggaggaggtcagcgcctcacaggcagccgtgcaggcg
gcggacacggacgaggcgctgagatgctacatccgctccaagccggccctgtaccagaag
gtgctgctgtaccagccctttgagctgggggagctgcaggcggagctgaagcagaacggc
ctccgtgtatcctcgcgcaggctactggacttcctggacacccattgtatcaccttcacc
accgccgctgcccgcagggagaagctccagggcaggaggcggtggcctcggagcaagaag
aaggcggcgcggaactga

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