Entry |
|
Symbol |
RXRA
|
Name |
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
|
KO |
K08524 | retinoid X receptor alpha |
|
Organism |
mcf Macaca fascicularis (crab-eating macaque)
|
Pathway |
mcf04919 | Thyroid hormone signaling pathway |
mcf04920 | Adipocytokine signaling pathway |
mcf04928 | Parathyroid hormone synthesis, secretion and action |
mcf04932 | Non-alcoholic fatty liver disease |
mcf05202 | Transcriptional misregulation in cancer |
mcf05207 | Chemical carcinogenesis - receptor activation |
|
Brite |
KEGG Orthology (KO) [BR:mcf00001]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102133330 (RXRA)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102133330 (RXRA)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
102133330 (RXRA)
09152 Endocrine system
04920 Adipocytokine signaling pathway
102133330 (RXRA)
03320 PPAR signaling pathway
102133330 (RXRA)
04919 Thyroid hormone signaling pathway
102133330 (RXRA)
04928 Parathyroid hormone synthesis, secretion and action
102133330 (RXRA)
09154 Digestive system
04976 Bile secretion
102133330 (RXRA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102133330 (RXRA)
05202 Transcriptional misregulation in cancer
102133330 (RXRA)
05207 Chemical carcinogenesis - receptor activation
102133330 (RXRA)
09162 Cancer: specific types
05226 Gastric cancer
102133330 (RXRA)
05216 Thyroid cancer
102133330 (RXRA)
05222 Small cell lung cancer
102133330 (RXRA)
05223 Non-small cell lung cancer
102133330 (RXRA)
09172 Infectious disease: viral
05160 Hepatitis C
102133330 (RXRA)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102133330 (RXRA)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
102133330 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:mcf03000]
102133330 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:mcf03310]
102133330 (RXRA)
Transcription factors [BR:mcf03000]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102133330 (RXRA)
Nuclear receptors [BR:mcf03310]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102133330 (RXRA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
15:complement(join(4924524..4924671,4926916..4927021,4929083..4929174,4931532..4931664,4940527..4940656,4945170..4945339,4953520..4953699,4954332..4954482,4960737..4960987,5039245..5039272))
|
AA seq |
462 aa
MDTKHFLPLDFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPING
MGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVP
AHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLID
KRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAEL
AVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVIL
LRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDM
QMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLL
RLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT |
NT seq |
1389 nt +upstreamnt +downstreamnt
atggacaccaaacatttcctgccgctcgatttctccacccaggtgaattcctccctcacc
tccccgacggggcgaggctccatggctgcgccctcgctgcacccgtccctggggcctggc
atcggctccccggggcagctgcactctcccatcagcaccctgagctcccccatcaacggc
atgggcccgcccttctcggtcatcagctcccccatgggcccccactccatgtcggtgccc
accacacccactctgggcttcagcactggcagcccccagctcagctcacccatgaacccg
gtcagcagcagcgaggacatcaagccccccctgggcctcaatggcgtcctcaaggtcccc
gcccacccctcaggaaacatggcttccttcaccaagcacatctgcgccatctgcggggac
cgctcctcaggcaagcactacggggtgtacagctgcgaggggtgtaagggcttcttcaag
cggacggtgcgcaaggacctgacctacacctgccgcgacaacaaggactgcctgattgac
aagcggcagcggaaccggtgccagtactgccgctaccagaagtgcctggccatgggcatg
aagcgggaagccgtgcaggaggagcggcagcgtggcaaggaccggaacgagaatgaggtg
gagtcgaccagcagcgccaacgaggacatgccggtggagaggatcctggaggctgagctg
gccgtggagcccaagactgagacctacgtggaggcgaacatggggctgaaccccagctcg
ccgaacgaccccgtcaccaacatttgccaagcagctgacaagcagctcttcacgctggtg
gagtgggccaagcggatcccacacttctcagagctgcccctggacgaccaggtcatcctg
ttgcgggcaggctggaatgaactgctcatcgcctccttctcccaccgctccatcgccgtg
aaggacgggatcctcctggccaccggactgcacgtccaccggaacagcgcccacagcgca
ggggtgggcgccatctttgacagggtgctgacagagctcgtgtccaagatgcgggacatg
cagatggacaagacggagctgggctgcctgcgcgccatcgtcctcttcaaccccgactcc
aaggggctctcgaacccggccgaggtggaggcgctgagggagaaggtctacgcgtccctg
gaggcctactgcaagcacaagtacccagagcagcccggaaggttcgccaagctgttgctc
cgcctgccggctctgcgctccatcgggctcaagtgcctggaacatctctttttcttcaag
ctcattggggacacgcccattgacaccttcctcatggagatgctggaggcgccgcaccaa
atgacttag |