KEGG   Macaca fascicularis (crab-eating macaque): 102136784
Entry
102136784         CDS       T02918                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102136784 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcf03041]
    102136784 (PRPF4)
Spliceosome [BR:mcf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    102136784 (PRPF4)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 PRP4 DSE1_N Beta-prop_EML ASA1 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_NOL10_N WD_LRWD1 Beta-prop_IFT140_1st WD40_like Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 102136784
NCBI-ProteinID: XP_005581089
Ensembl: ENSMFAG00000039397
UniProt: A0A7N9D604
LinkDB
Position
15:complement(join(44809222..44809415,44809931..44810049,44810140..44810247,44810359..44810481,44812692..44812781,44814124..44814247,44814692..44814750,44816869..44816963,44817682..44817775,44817943..44818022,44818414..44818501,44821917..44822103,44824522..44824699,44825467..44825493))
AA seq 521 aa
MASSRTSSTATKTKTPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcttcctcgcgaacctcctccacggcaaccaaaactaaaacacccgatgacttagtt
gctccggttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagggag
cgtctggccaaaggagagtctgggattttggggaaagaaggacttaaagcagggatcgaa
gctggaaatattaatataacctctggagaagtgtttgaaattgaagagcatatcagtgag
cgacaggcagaagtattggctgagtttgagagaaggaagcgagcccggcagatcaatgtt
tccacagatgactcagaggtcaaggcttgccttagagccttgggggaacccatcacactt
tttggagagggtcctgctgaaagaagagaaaggttaagaaatatcctctcagtcgtcggt
actgatgccttgaaaaagaccaaaaaggatgatgagaagtctaagaagtccaaagaagag
tatcagcagacctggtaccatgaaggaccaaatagcttgaaggtggcaagactatggatt
gctaattattcattgcccagggcaatgaaacgcttggaagaggcccgactccataaggag
attcctgagacaacaaggacctcccagatgcaagagctgcacaagtctctccggtctttg
aataatttttgcagtcagattggggatgatcggcctatctcctactgtcactttagtccc
aattccaagatgctggccacagcttgttggagtgggctttgcaagctctggtctgttcct
gattgcaacctccttcacactcttcgagggcataacacaaatgtaggagcaattgtattc
catcccaaatctactgtctccttggaccaaaaagatgtcaacctggcctcttgtgcggct
gatggctctgtgaagctttggagtctcgacagtgatgaaccagtggcagatattgaaggc
catacagtgcgtgtggcccgggtaatgtggcatccatcaggacgtttcctgggcaccacc
tgctatgaccgttcatggcgattatgggatttggaggctcaagaggagatcctgcatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggtcgagtttgggacctacgcacaggacgttgtatcatg
ttcttagaaggccacctgaaagaaatctatggaataaatttctcccccaatggctatcat
attgcaaccggcagtggtgacaacacctgcaaagtgtgggaccttcgacagcggcgttgc
gtctacaccatccctgctcatcagaacttagtgactggtgtgaagtttgagcctatccat
gggaacttcttgcttacgggtgcctatgataacacagccaagatctggacacacccaggc
tggtccccgctgaagactctggccggccatgaaggcaaagtgatgggcctagatatttct
tccgatgggcagctcatagccacttgctcgtatgataggaccttcaagctctggatggct
gaatag

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