Macaca fascicularis (crab-eating macaque): 102138455
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Entry
102138455 CDS
T02918
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102138455 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcf01009
]
102138455 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcf04515
]
102138455 (PCDH20)
Protein phosphatases and associated proteins [BR:
mcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102138455 (PCDH20)
Cell adhesion molecules [BR:
mcf04515
]
Cadherins
Protocadherins
102138455 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
102138455
NCBI-ProteinID:
XP_005586009
Ensembl:
ENSMFAG00000001794
LinkDB
All DBs
Position
17:complement(join(40881540..40884266,40885314..40885445))
Genome browser
AA seq
952 aa
AA seq
DB search
MRGRGNARSSRALGVSWYPATWHPRLDMGRLHRPRSSTSHRNLPHLFLFFLFVEPFSCLA
SHSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRSAGRLDPHSQLPERTGAEWNPPLSFS
LASRGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGTAWGGSVSISSSPSSDSCLLL
LDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAVDPDV
GINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAEDGGSPP
LLGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNAQITYSY
SQKVPQASKDLFHLDENTGVIKLFNKIGGSVLQSHKLTILANGPGCIPAVITALVSVIKV
IFRPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSP
YKPYNNEYLLETTKPMDYELQQFYEVAVVAWNSEGFHVKRVIKVQLLDDNDNAPIFLQPL
IELTIEENNSPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDR
EEKERYRYTVRAVDGGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGE
PALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLG
SITLVTGMGIYICLRKGKKHPREDENLEVQIPLKGKIDLHMRERKPMDISNI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaatgcgcgcagctcgcgggccttgggagtgagctggtacccggcg
acctggcacccgcgcctggatatggggcgtctacatcgtcccaggagcagcaccagccac
aggaacctgccgcatctgtttctgtttttcctcttcgtggaacccttcagctgcctcgcg
agtcacagccgggccaccgagcttctgtacagcctgaacgagggactgcccgcgggggtg
ctcatcggcagcctggccgaggacctgcggctgctgccccggtctgcagggaggctggac
ccgcattcgcagctgccagagcgcaccggtgctgagtggaacccccctctctctttcagc
ctggcctcccggggactgagtggccagtacgtgaccctagacaaccgctctggggagctg
cacacttcagctcaggagatcgacagggaggccctgtgtcttgaagggggcggagggacc
gcgtggggcggcagcgtttccatctcctcctctccttcttctgactcttgtcttttactg
ctggatgtgcttgtcctgcctcaggaatatttcaggtttgtgaaggtgaagatcgccata
agagacatcaatgacaatgccccacagttccctgtttcccaaatctcggtgtgggtcccg
gaaaatgcacctgtaaacacccgattggccatagagcatcctgctgtggacccagatgta
ggcattaatggggtacagacctatcgcttactggactaccatggtatgttcaccctggac
gtggaggaaaatgagaacggggagcgcaccccctacctaattgtcatgggtgctttggac
agggaaacccaggaccaatatgtgagcatcatcatagctgaggatggtggatctccacca
cttttgggcagtgccaccctcaccattggcataagtgacattaatgacaattgccctctc
ttcacagactcacaaatcaatgtcactgtgtatgggaatgctacagtgggcaccccaatt
gcagctgtccaggctgtggataaagacttggggaccaatgctcaaattacttattcttac
agtcagaaagttccacaagcatctaaggatttatttcacctggatgaaaacactggagtc
attaaacttttcaataagattgggggaagtgttctgcagtctcacaagctcaccatcctt
gctaatggaccaggctgcatccctgctgtaatcactgctcttgtgtccgttatcaaagtt
attttcagaccccctgagattgtccctcgttacatagcaaacgagatagatggtgttgtt
tatctgaaagaactggaacccgtgaacactcccattgcgtttttcaccataagagatcca
gaaggtaaatacaaggttaactgctacctggatggtgaaggcccgtttaggttatcacct
tacaaaccatacaataatgaatatttactagagaccacaaaacctatggactatgagcta
cagcagttctatgaagtagctgtggtggcttggaactctgaaggatttcatgtcaaaaga
gtaattaaagtgcaacttttagatgacaatgataatgctccaattttccttcaaccctta
atagaactaaccattgaagaaaacaactcacccaatgcctttttgactaagctgtatgct
acagatgccgacagtggggaaagaggccaagtttcatattttctgggacctgatgctcca
tcatatttttccttagacagtgtcacaggaattctgacagtttctactcagctggaccga
gaagagaaagaaaggtacagatacaccgtcagagctgttgacggtgggaagccacccaga
gaatcagtagccactgtggccctcacggtgttggataaaaatgacaacagtcctcggttt
atcaacaaggacttcagcttttttgtgcctgaaaactttccaggctatggtgagattgga
gtaattagtgtaacagatgctgatgctgggcggaatggctgggtcgccctctctgtggtg
aaccagagtgatatttttgtcatagatacaggaaagggtatgctgagggctaaagtctct
ttggaccgagaacagcaaagctcctatactttgtgggttgaggctgttgatgggggtgaa
cccgccctctcctctacagccaaaatcacaattctccttctagatatcaatgacaaccct
cctcttgttttatttcctcagtctaatatgtcttatctgttagtactgccttctactctc
ccaggctccccagttacagaagtctatgctgtcgacaaagacacaggcatgaatgctgtc
atagcttacagcatcatagggagaagaggccctaggcctgagtccttcaggattgacccc
aaaactggcaacattactttggaagaggcattgctgcagacagattatgggctccatcgc
ttactggtgaaagtgagtgatcatggttatcctgagcctcttcactccacggtcatggtg
aacctatttgtcaatgacactgtcagtaatgagagttacattgagagtcttttaagaaaa
gaaccagagattaatatagaggagaaagaaccacaaatctcaatagaaccgactcatagg
aaggtagaatctgtgtcctgtatgcccaccttagtagctctgtctgtaataagcttgggt
tccatcacactggtcacagggatgggcatatacatctgtttaaggaaagggaaaaagcat
cccagggaagatgaaaatttggaagtacagattccactgaaaggaaaaattgacttgcac
atgcgagagagaaagccaatggatatttctaatatttga
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