KEGG   Macaca fascicularis (crab-eating macaque): 102141416
Entry
102141416         CDS       T02918                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 isoform X1
  KO
K13175  THO complex subunit 6
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03013  Nucleocytoplasmic transport
mcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102141416 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102141416 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcf03019]
    102141416 (THOC6)
   03041 Spliceosome [BR:mcf03041]
    102141416 (THOC6)
Messenger RNA biogenesis [BR:mcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102141416 (THOC6)
Spliceosome [BR:mcf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102141416 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WDR55 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_EML_2 WD40_Gbeta Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_IP5PC_F EIF3I WDR54 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 102141416
NCBI-ProteinID: XP_005591082
Ensembl: ENSMFAG00000038242
UniProt: G7Q0B3 A0A8J8XWH0
LinkDB
Position
20:join(3822115..3822153,3824137..3824252,3824354..3824418,3824493..3824596,3824681..3824718,3824796..3824844,3824947..3825018,3825110..3825212,3825298..3825347,3825437..3825499,3825596..3825706,3825792..3825926,3826003..3826083)
AA seq 341 aa
MERAVPLAVPLGQTEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEMLKKGCKELWHRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRVLRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgagctgtgccgctcgcggtaccgctgggtcagacagaggtgttccaggccttg
cagcggctccatatgaccatcttctcccagagtgtctcaccgtgtgggaagtttctggcg
gctggcaacaattatgggcagattgccatcttcagcttgtccgctgctttgagctccgaa
gccaaagaggaaagtaagaagccggtggtgactttccaagcccatgatgggcctgtctat
agcatggtctccaccgatcgacatctgcttagtgctggggatggggaggtgaaggcctgg
ctttgggcggagatgctcaagaaggggtgtaaggagctgtggcatcggcagcctccatac
aggaccagcctggaagtgcccgagatcaatgctctgctgctggtccccaaggagaactct
ctcatcctggctgggggagactgtcagttgcacactatggaccttgaaactgggactttc
acgcgggtcctccggggccacacagactacatccattgcctggcactgcgggaaaggagc
ccagaggtgctgtcaggtggcgaggacggagctgttcgactttgggacctgcgcacagcc
aaggaggtccagacgatcgaggtctataagcacgaggagtgctcaaggccccacaatgga
cgctggatcggatgcttggcaactgattccgactggatggtctgtggagggggcccagcc
ctcaccctctggcacctccgatcctccacacctaccactgtcttccccatccgggcgcca
cagaagcatgtcaccttctaccaggacctgattctgtcggctggccagggccgctgtgtc
aaccagtggcagctgagcggggagctgaaggcccaggtgcctggctcctccccagggctg
ctcagcctcagcctcaaccagcagcccgccgcgcccgagtgcaaggtcctgacagctgca
ggtaacagctgccgggtggatgtcttcaccaacctgggctaccgagccttctccctgtcc
ttctga

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