KEGG   Macaca fascicularis (crab-eating macaque): 102142552
Entry
102142552         CDS       T02918                                 
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X1
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:5.6.2.7]
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcf03041]
    102142552 (DDX20)
Enzymes [BR:mcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102142552 (DDX20)
Spliceosome [BR:mcf03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    102142552 (DDX20)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30
Other DBs
NCBI-GeneID: 102142552
NCBI-ProteinID: XP_015286647
Ensembl: ENSMFAG00000031755
LinkDB
Position
1:complement(join(122597704..122598869,122601591..122601692,122601814..122601919,122602277..122602359,122603323..122603381,122603482..122603620,122603759..122603901,122604019..122604133,122604732..122604900,122607887..122607981,122608414..122608714))
AA seq 825 aa
MAAAFEALGAVAAVATAMPAEHVAVHVPAPEPTLGPMRSLRTAQDLGSPRTRTGDVLLAE
PADFESLLLSRSVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKVFEEKTQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
MMMRIAQKCNINLLPLPDPIPSGLMEECVDWDVEVKAAVHTYGIASAPNQPLKKQIQKIE
RTLQIQKAHGDHMASSRNTSVSGLSVKSKNNTKQKLPLKSHSECGIIEKAMPPKEVSCDR
QSEEQKMKNSVQTPVENSTNSQHQVKEALPVSLPQIPCLSSFKIHQPYTLTFAELVEDYE
HYIKEGLEKPVEIIRHYTGPGDQTVNPQNGFVRNKVTEQRVPILASSSQSGDSESDSDSY
SSRTSSQSKGNKSYLEGSSDNQLKDSESTPVDDHISLEQPPNGSDTPNPEEYQESSGIQI
KTRHKEGASQRAKQSRRNLPRRSSFRLQTETQEDGWYDCHRETHLSFSDTYQDYEEYWRA
YYRAWQEYYAAASHSYYWNAQRHPSWMAAYHMNTIYLQEMLHGNQ
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggcggcggcgtttgaagccctgggagccgtagcggcagtggctactgctatgccagct
gagcatgtggccgtgcacgtcccggccccagagccaacacttgggcctatgaggagcctg
cggaccgctcaggatctcggcagcccgcggacccgcacgggggacgtgctgttggcggag
ccggccgacttcgagtcactgctgctttcgcggtcagtgctggaggggctgcgggcagcc
ggcttcgagaggccctcgccggtgcagctcaaggccatcccgctggggcgctgcgggctc
gatttaattgttcaagctaaatctggcactgggaaaacctgtgtgttttccaccatagct
ttggactctcttgttcttgaaaacttaagtacccagattttgatcttggcccctacaaga
gaaattgctgtacagatacattctgttattacagccattggaatcaaaatggaaggctta
gagtgtcatgtctttattggagggaccccgttatcacaagacaaaaccagacttaaaaag
tgtcatattgctgttggatctcctggcagaattaagcaactcatagaacttgactacttg
aacccaggcagtatacgcctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaattggatttattcttccttgcctgccagtaaacagatgctg
gcagtatcagctacttaccctgaatttttggctaatgctttgacaaagtacatgagagat
cccacttttgtaagactgaattccagtgatccaagtcttataggtttgaagcagtattac
aaaattgtcaattcataccctttggcacataaggtttttgaggaaaagactcagcattta
caggaactgttcagcagaattccatttaatcaagctttagtcttttctaatttgcacagc
agagcacaacatttggctgatatcctttcttctaaaggctttcctgctgagtgcatttca
ggcaatatgaatcagaatcagcgtcttgatgctatggctaaactgaagcagtttcattgc
agagtcctcatttccacagatttgacttctcgtgggattgatgctgagaaggtgaatctg
gttgtaaatctggatgtaccattggattgggagacatacatgcatcggattgggagagct
ggccgttttggtacattgggactgacagtgacctactgttgccggggagaggaagaaaat
atgatgatgagaattgcccagaaatgtaatatcaaccttctccctttaccagatcccatt
ccttctggtctgatggaagaatgtgtggattgggatgtggaggttaaagctgctgtgcat
acatatggcatagcaagtgcacctaaccaacccctaaaaaagcaaattcagaaaatagag
agaacccttcaaattcagaaagctcatggtgaccacatggcgtcctctagaaatacttct
gtatctggactatcagtcaagtcaaaaaataataccaaacaaaagcttcctctgaaaagc
cactctgagtgtggaatcatagaaaaagcaatgccaccaaaagaagtgagctgtgacagg
caatctgaagagcaaaaaatgaagaattctgttcagacccccgttgaaaactccaccaac
agtcagcaccaggtcaaagaagctttacctgtgtcactcccccaaattccttgtctgtct
tcctttaaaatccatcagccatacacattgacttttgctgaattggtagaggattatgaa
cattatattaaagaggggttagagaaacctgtggaaatcatcaggcactacacaggtcct
ggggatcagactgtgaatcctcaaaatggttttgtgagaaataaagttactgaacagaga
gtccccatattggcaagtagtagccaatctggagactctgagagtgacagtgattcttac
agctcaagaacctcttcccagagcaaaggaaataagtcatacttggaaggctcttctgat
aatcagctgaaagactctgaatctactcctgtggatgatcatatttctttggaacaacct
ccaaatggaagtgacacccccaatccagaggaatatcaagaatcatctggaatccagatc
aagacaagacataaagagggggctagccagagagctaagcagagccggagaaacctacct
aggcggtcttcctttagattgcagactgaaacccaggaagatggttggtatgactgtcat
agggaaacacatctgagtttttctgatacctatcaggattatgaggagtactggagagct
tactacagggcatggcaagaatattatgctgccgcttctcattcatattattggaatgct
cagagacatccaagttggatggcagcttatcacatgaataccatttatctacaagaaatg
ttgcatggtaaccagtga

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