KEGG   Macaca fascicularis (crab-eating macaque): 102144654
Entry
102144654         CDS       T02918                                 
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2 isoform X1
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf03018  RNA degradation
mcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102144654 (LSM2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102144654 (LSM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcf03019]
    102144654 (LSM2)
   03041 Spliceosome [BR:mcf03041]
    102144654 (LSM2)
Messenger RNA biogenesis [BR:mcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102144654 (LSM2)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     102144654 (LSM2)
Spliceosome [BR:mcf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    102144654 (LSM2)
 Complex C
  U2 snRNP components
    102144654 (LSM2)
SSDB
Motif
Pfam: LSM SM-ATX DYW_deaminase
Other DBs
NCBI-GeneID: 102144654
NCBI-ProteinID: XP_005553527
Ensembl: ENSMFAG00000001016
LinkDB
Position
4:join(139907746..139907835,139908177..139908244,139917914..139917944,139918359..139918418,139918520..139918645)
AA seq 124 aa
MMRKKTPTLREIQWGQRETEKLDLRALLCQLFYSFFKSLVGKDVVVELKNDLSICGTLHS
VDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEAL
QQKQ
NT seq 375 nt   +upstreamnt  +downstreamnt
atgatgaggaaaaaaaccccaaccctgagagagattcagtggggacagcgggagacggaa
aagttagaccttagagcacttctctgccagctcttctattcttttttcaagtcccttgtg
ggcaaggatgtggtcgtggaactcaagaatgacctgagcatctgtggaaccctccattct
gtggatcagtatctcaacatcaaactaactgacatcagtgtcacagaccctgagaaatat
cctcacatgttatcagtgaagaactgcttcattcggggctcagtggtccgatatgtgcag
ctgccagcagacgaggtcgacacacagttgctgcaggatgcggcaaggaaagaagccctg
cagcagaaacagtga

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