KEGG T02918: 102146451

Macaca fascicularis (crab-eating macaque): 102146451

Entry

102146451         CDS       T02918

Symbol

VPS39

Name

(RefSeq) vam6/Vps39-like protein isoform X1

K20183

Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39

Organism

mcf Macaca fascicularis (crab-eating macaque)

Pathway

mcf04140

Autophagy - animal

mcf04148

Efferocytosis

mcf05132

Salmonella infection

Brite

KEGG Orthology (KO) [BR:mcf00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102146451 (VPS39)
   04148 Efferocytosis
    102146451 (VPS39)
09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102146451 (VPS39)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcf04131]
    102146451 (VPS39)
Membrane trafficking [BR:mcf04131]
Endosome - Lysosome transport
  Tethering complex
   Hops complex
    102146451 (VPS39)

SSDB

Motif

Pfam:

Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin KCTD11_21_C DUF4145

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

7:complement(join(18746798..18746873,18747732..18747823,18748079..18748213,18748368..18748517,18749394..18749439,18749665..18749767,18750390..18750518,18751023..18751140,18751745..18751843,18752184..18752257,18752588..18752674,18752797..18752938,18753412..18753555,18755737..18755879,18759756..18759885,18763848..18763968,18764080..18764200,18770439..18770622,18773134..18773226,18773615..18773713,18774967..18775061,18775916..18775958,18776617..18776681,18777184..18777216,18783056..18783121,18791577..18791649))

AA seq 886 aa
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPAAVASPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQRLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLA
VPYLEHIIHVWEETGARFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEY
RQKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAE
EYCHKHYDQNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHS
KLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT

NT seq 2661 nt +upstreamnt +downstreamnt
atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctcttcaaatcgactgt
ctcgctgcctgggaggaatggcttcttgtgggaaccaaacaaggacatcttcttctctat
aggattcggaaggacgttgtgccagcagctgtagcatcacctgaaagtggcagttgcaac
agatttgaagtgacactagagaaatccaataagaacttctccaaaaaaattcagcagatc
catgtggtttcccagtttaagattctggtcagcttgttagaaaataacatttatgtccat
gacctattgacatttcaacaaatcactacggtttcaaaggcaaagggagcatcactgttt
acgtgtgacctccagcacacagagaccggtgaggaggtgttgcggatgtgtgtggcagta
aaaaagaagctgcagctctatttctggaaggacagggaatttcatgaattgcagggggac
tttagtgtaccagatgtgcccaagtccatggcgtggtgtgaaaattctatctgtgtgggt
ttcaagagagactactacctaatacgggtggatggaaaggggtccatcaaagagctcttt
ccaacaggaaaacagctggagcccttagttgcacctctggcagatggaaaagtggctgtg
ggccaggatgatctcaccgtggtactcaatgaggaagggatctgcacacagaagtgtgcc
ctgaactggacggacatacccgtggccatggagcaccagcctccctacatcattgcagtg
ttgcctcgatacgtggagatccgaacatttgaaccgaggcttctggtccagagcattgaa
ttgcaaaggccccgtttcattacctcaggaggatcaaacattatctatgtggccagcaat
cattttgtttggagactcatccctgtcccgatggcaacccaaatccaacaacttctccag
gacaagcagtttgaattggctctgcagctcgcagaaatgaaagatgattccgacagtgaa
aagcaacaacagattcatcacatcaagaacttgtatgctttcaacctcttctgccagaag
cgttttgatgagtccatgcaggtctttgctaaacttggcacagatcccacccacgtgatg
ggcctgtacccggacctgctgcccacagactacaggaagcagttgcagtatcccaaccca
ctgcctgtgctctctggggctgaattggagaaggctcacttagctctgattgactacctg
acacagaaacgaagtcaattggtaaagaagctgaacgactctgatcaccagtcaagcacc
tccccactcatggaaggcactcccaccatcaaatccaagaagaagctgctacaaatcatc
gacaccaccctgctcaagtgctatctccatacgaacgtggccctggtggcccccttgcta
cgcctggagaacaatcactgccacattgaggagagcgagcacgtgctgaagaaggctcac
aagtacagtgagcttatcatcctgtatgagaagaaggggctccacgagaaagctctgcag
gtgctcgtggaccagtccaagaaagccaactcccctctgaaaggccacgagaggacagtg
cagtatctgcagcgtctgggcacagaaaacctgcatttaattttctcctactctgtgtgg
gtgctgagagacttcccagaagatggcctgaagatatttactgaagatctcccagaagtg
gagtctctgccacgtgatcgagtcctcggcttcttagtagagaattttaagggtctggct
gttccttatctggaacacatcatccacgtttgggaggagacaggagctcggttccacaac
tgcctgatccagctgtactgtgaaaaggtgcaaggtctgatgaaggagtacctcctgtcc
ttccccgcaggcaaaaccccagtcccagctggagaggaagagggcgaactgggagaatac
cggcaaaagctcctcatgttcttggagatttccagctactatgatccgggccggctcatc
tgtgattttccctttgatggcctcttagaagaacgagctctcctgttggggcgcatgggg
aaacacgaacaagctcttttcatttatgtccacatcttgaaggatacaaggatggctgag
gagtactgccacaaacactatgaccaaaacaaagatggcaacaaagatgtgtatctgtcc
ctgcttcggatgtacctgtcgccccccagcattcactgcctggggccaatcaagctggaa
ctgctggagccaaaagccaacctccaggctgccctgcaggtcctggagctgcaccacagc
aaactggacaccaccaaggccctcaaccttctgccagcaaacactcagatcaatgacata
cgcatcttcctggaaaaggtcttggaagaaaatgcacaaaagaaacggttcaatcaagtg
ctcaagaaccttctccatgcagagttcctgagggtccaggaagagcggattttacaccag
caggtgaagtgcatcatcacagaggagaaggtgtgcatggtgtgtaagaagaagattggg
aatagtgcatttgcaagataccccaatggagtggtcgtgcactacttctgttccaaagag
gtaaacccagctgacacttga

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