Methyloceanibacter caenitepidi: GL4_0039
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Entry
GL4_0039 CDS
T03636
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mcg
Methyloceanibacter caenitepidi
Brite
KEGG Orthology (KO) [BR:
mcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcg03400
]
GL4_0039
Enzymes [BR:
mcg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GL4_0039
DNA repair and recombination proteins [BR:
mcg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GL4_0039
Prokaryotic type
GL4_0039
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAQ15510
UniProt:
A0A0A8JY55
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All DBs
Position
36741..38186
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AA seq
481 aa
AA seq
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MNADATRPAIVWFRKDLRLADHEALTAAVEAGLPVLPLYIHDVETPGAPRPGGASRWWLH
ESLQALDASLSECGGALIVRAGRTRGVLAEILRETNATAIHATESYEPFGTRCEADVEKL
CREHDVAFHLHRGRLLFVPDDIVTKDGRPYRVFTPFWKSCLAQPAPPPPGAAPKFNSFAD
ARSLQLAELKLQPSKPDWAGGLRKSWTPGERAAKDALSEFIDERIGAYATQRDALPGTPT
SLLSPYLHFGEISPAQVWHAVSHAIDAEGGAIEKGANAFLREIGWREFSYHLLHSFPDLP
DVPLRPEFKNFPWRDDKKALTAWQRGQTGYPVVDAAMRQLWETGWMPNRARMVVASFLVK
HLLLPWQAGAAWFWDTLVDADLANNSASWQWVSGCGADAAPYFRIFNPILQGQKFDPEGE
YVRTWVPELAELPANDIHAPWDAPPTVLAAAGVVLGKDYPEPIVDHAAARSRALRALEST
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagacgcgacacgcccagccatcgtttggttccgcaaggaccttcgcctcgcc
gatcatgaagcgctgaccgctgccgttgaggcgggcttgccggtactgccgctgtacata
catgacgtagaaacgcctggcgctccacgtcccggtggggcgtcgcgctggtggctgcat
gagagcctccaggcgctggacgcatctctgtccgagtgtggcggcgcgctcatcgtgagg
gccggacggacccgcggcgtcttggccgagatcctgcgcgagacgaacgccaccgcgatc
catgccacagaaagctacgaaccctttggcacgcgatgcgaggccgatgtcgaaaagtta
tgccgcgaacacgacgtcgcgtttcatctgcaccgcgggcggcttctctttgtgccggac
gacatcgtcaccaaggacggtcgcccataccgcgtgttcacgccgttctggaaatcctgt
cttgctcaacccgccccgccgccgcccggcgcagcgccgaagttcaacagctttgcggac
gcgcggagcctacagttggccgagttgaagctccaaccctcgaagcccgattgggccggt
ggcttgcggaaatcctggacgcctggcgagcgggccgcgaaagacgcgctctcggagttc
atcgacgagcggatcggcgcctacgccacgcagcgggacgccctccccggcacgcccaca
tcgctgctttcgccctacctgcatttcggcgagataagcccggcccaggtctggcacgcg
gtgtcccacgcgattgacgcggagggcggcgccatcgaaaaaggggcaaacgccttcctg
cgcgagatcggctggcgcgagttctcctatcatctcctgcacagcttcccggacttgccg
gacgtccccttgcggccggaattcaagaacttcccgtggcgcgacgacaagaaagcgctc
accgcctggcagcgcgggcagacgggctatccggtcgtggatgcggccatgcgccagctc
tgggaaactggctggatgcccaaccgcgcgcgcatggtcgtcgcgtcctttctcgtgaag
catctgctcctgccgtggcaggcgggcgcggcctggttctgggatacgctggtggacgcc
gacctcgccaacaattcggcgagctggcagtgggtctccggctgcggcgcggacgcggcg
ccctatttccgcatcttcaatcccatcctccagggccagaagttcgatccggaaggtgaa
tatgtgcggacctgggttccggaactcgcggagctgccggcgaacgatatccatgcgccc
tgggacgcaccgcctaccgttcttgccgcggcgggtgtcgtgctggggaaggactatccc
gagcccatagtcgatcacgcggccgcgcggtcacgggccctccgagcgctcgaaagcacc
aaatag
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