Methyloceanibacter caenitepidi: GL4_0317
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Entry
GL4_0317 CDS
T03636
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mcg
Methyloceanibacter caenitepidi
Pathway
mcg03030
DNA replication
mcg03430
Mismatch repair
mcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GL4_0317
03430 Mismatch repair
GL4_0317
03440 Homologous recombination
GL4_0317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcg03032
]
GL4_0317
03400 DNA repair and recombination proteins [BR:
mcg03400
]
GL4_0317
Enzymes [BR:
mcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GL4_0317
DNA replication proteins [BR:
mcg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GL4_0317
DNA repair and recombination proteins [BR:
mcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GL4_0317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF1719
Motif
Other DBs
NCBI-ProteinID:
BAQ15787
UniProt:
A0A0A8JZL6
LinkDB
All DBs
Position
complement(332231..332920)
Genome browser
AA seq
229 aa
AA seq
DB search
MREIILDTETTGLEPKEGHRIVEIGCVELVNSIPTGRTWHCYLNPERDMPEQAFAVHGLS
TEFLGDKPLFADKADEFLEFVESARLVIHNAKFDFGFLNAELGWASKPLLTWDRIVDTLA
LARRRHPGSPASLDALCRRYGIDLSGRDLHGALLDCRLLAAVYVELVGGKQARLELAGNG
AQQADPAGNAVTVAPRAAPLPSRLTAEEREAHRAFVATLGEDAIWHRYE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagatcatactcgatacggaaacgacgggtctcgaacccaaagagggacatcgg
atcgtcgagatcggctgcgtggagctggtcaactccattcccacgggccggacttggcac
tgctatctgaatcccgagcgcgacatgcctgaacaggctttcgccgtgcacgggctctcc
accgagttcctcggtgataagcctctgttcgcggacaaggccgacgagttcctggaattc
gtcgaaagcgcgaggctcgtcattcacaatgcgaagttcgacttcggcttcttgaacgcg
gagctcggctgggcgtccaagccgctcctgacctgggacagaatcgtggacacgctggcg
ctggcgcggcggcgccatcctggatcgccggcaagtctcgatgctctgtgccgccgctat
ggcatcgacctcagcgggcgcgatctccacggcgcgctcctggactgccgtctgctggcc
gccgtctacgtggaactcgtcggcggaaagcaggcgcggctggagctggccggaaacgga
gcgcagcaggccgatccggcgggcaatgccgtcacggtcgccccgcgcgcggcgccgctg
ccctcgcgcctgacggcagaggaacgcgaagcccatcgcgccttcgtcgccacgttgggc
gaagacgcgatctggcaccgctacgagtga
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