Methyloceanibacter caenitepidi: GL4_0391
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Entry
GL4_0391 CDS
T03636
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mcg
Methyloceanibacter caenitepidi
Brite
KEGG Orthology (KO) [BR:
mcg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcg01002
]
GL4_0391
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mcg01011
]
GL4_0391
Peptidases and inhibitors [BR:
mcg01002
]
Cysteine peptidases
Family C82
GL4_0391
Peptidoglycan biosynthesis and degradation proteins [BR:
mcg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GL4_0391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
Motif
Other DBs
NCBI-ProteinID:
BAQ15859
UniProt:
A0A0A8K1L6
LinkDB
All DBs
Position
411402..414905
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AA seq
1167 aa
AA seq
DB search
MRGRIAIIGLTALALLALGIGTSAVPGTATAEFRVPGLFGGKKVVKRRRYRRPAPVEPVR
NPDRIFATASAKTVSPDVAKGSDNALVVGAVSTASVVMALPAAVALAATTDDSDDNALAD
NKSDETMTAESDEIPASESGDTTSDSKTESADASDASDKKAEPDSTADAEDSPGQADEDK
PAVADSSSADAESASDAPTAEADESDTPEDATDTAAVTEETAETKSADAEPAEDHTSSDT
KTAETVTDDEASDTKLADAESDKSDTETATDSEANADEGDASVTAAADTDEDKSAESKTP
ESKTADTENSDDQAAGTKTADATTADGETAGTEAAEEKTAADDSDGDKTAGDKAEEEPQS
KTAAADAPEESETASADASAKSEDAADEDKRDEAAETAAKSEDTAKDEAAKAATAAAAAA
ASAAAAAAGADAESKDPETDEPAKVADSAKDEDATVEDSEDADAKQADAEDGDTKSADAK
TADTETADAKNADTKTSDTKAGEDTDSEGVAENAEEPADKADDSKGEIVTASLPPAPEPK
PEIARMASPANTPERAAETATDDEDNGPSLDGEVTASISPSSEPDGMAHSDEAQDVTDVA
RSSDEDPAEEPLELDPRAYSATVVLDVSPPPGAEAGGEDTQVAALEPGSARLTADDEKSE
GEDTKEAVDLGPPPPPPVDPVIESVRAKLEGSTAPKVATADLEALKTLYGERDEDPLWIA
DDSLTPKAKALVATVRDADDWGLDAAAYEVPSPEVALTTDEARADAELALSAAVLKYARH
AQTGRLTPSSAHKLFDFNPRARDPKTVLTEIAASDTPDKALLALHPQSEQYQRLHTALVQ
ARDSAKQAGRNPDNDRTVQLIAINMERWRWLPSDLGNFHVWNNIPEFKFRVLKGGRTIYE
EKTIVGQTQYATAFFSAPMRNIVFNPNWTVPPTIVKEDIAPKLKGPQRSGGLFGGRESRN
RMLSRYGLKVSKGGKPVDADAVDWQTVNVHAYTFQQDPGPHNVLGQFKFNFPNKHAIYMH
DTTQKELFGRRVRTLSHGCIRVNQPARFAAFLLNEDKGWSMGTVQDILARAQGQTKVIAL
DHKIPVHLTYNTAIADGYGSIREFGDVYGIDNRMAAKLFKNPAHFNVPVSGPEVAETSPT
QRYSEPRPRRRRTANSVDDFISGILGN
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaggggacgaattgccattattgggctgacggcattggcccttttggcattggggatt
ggtacgagcgcggttccaggcacggcaacggcagaattccgcgtgcccggcctgttcggc
ggcaagaaggtcgtcaagcgcagacgctatcgccgccctgcgcccgtcgagccggttcga
aaccccgacaggatcttcgccaccgcctccgccaagaccgtctcgcccgacgttgccaag
ggcagcgacaacgcgctcgtcgttggtgccgtgtcgactgccagcgtggtcatggcgctg
cctgcggcagtggctctcgcggccacgacagacgattccgacgacaatgctctcgccgac
aacaagtccgacgaaaccatgacggccgaatcggatgagattccggcgtccgaatccggc
gacacgacgtccgactccaagaccgagagtgcggatgcgtccgatgcgtccgacaagaag
gccgagccggactcgacggctgacgcggaggacagcccaggccaggcggacgaggacaag
ccggctgtggcggattcctcgtctgcggatgctgagagtgcttccgatgcgccgaccgcc
gaggcggatgagtcggacacgccagaagatgcgaccgacacggccgcggtgacggaagag
accgccgagacaaagtcagcagacgccgaacccgcagaagaccatacgtcgtccgacacc
aagaccgccgaaacggtgacggatgacgaggcgtcggatacgaagctcgcggacgccgaa
tcggacaagtccgacaccgagaccgcaactgactccgaggcgaatgccgacgagggcgat
gcgtctgtgacggcggctgccgataccgacgaagacaagtcggccgagtccaaaacgccc
gaatctaagacggctgacacagagaactccgacgaccaagcggccggaaccaagacagcg
gacgcgacgaccgctgacggcgagaccgccggcacggaagctgccgaggaaaagacggcg
gcggacgacagtgacggcgacaagacggcgggcgacaaggcagaggaagagcctcagtcg
aagaccgccgctgcggacgcacctgaagagtccgaaaccgcatcggccgatgcatccgca
aagtcggaggatgccgccgacgaagacaaacgcgacgaagccgccgagactgctgccaag
tccgaggacaccgccaaagacgaagccgctaaagcggcgacggccgccgccgccgcagca
gctagtgcagccgcggccgcagcgggggctgacgccgagagcaaggaccccgagaccgac
gagccggcgaaggttgccgacagcgccaaggacgaagacgcgaccgtcgaagactcggag
gatgccgacgccaagcaggcggatgccgaggatggcgataccaagagcgccgacgccaaa
actgcagacactgagaccgcagacgccaagaacgccgataccaagacttccgataccaag
gctggcgaggatacggatagcgagggcgtcgccgagaacgccgaggagccagccgacaag
gctgacgattccaagggcgagatcgtgaccgcgtctcttccgcccgctccggagccgaag
cccgagatcgcccgcatggcgagcccggccaacacgcccgaacgtgcggcggagaccgca
acagacgatgaggacaacgggccgtccctcgatggcgaagtcacggcctcgatctcacca
tcctccgagccggacggcatggcccattcggacgaagcgcaggacgttacggatgtggcc
cgctcgtcggatgaagaccctgccgaagagcctcttgagctcgatccgcgcgcctattcc
gcgacggtcgttctcgacgtctcgccgccgcctggcgccgaggcgggtggtgaggacacc
caggtcgcggcgctcgagcccggttcggcacggttgaccgccgacgatgagaagtccgaa
ggcgaagacacgaaagaggcggtcgatcttggcccgccccctccgccgcctgtcgatcct
gtcatcgagagcgtgcgcgccaagctcgaagggtccacggcgcccaaggtggcgacagcg
gatctggaagcgctcaagacgctctatggcgagcgtgacgaggatccgctctggatcgcc
gacgacagcctgacccccaaagccaaggcgctggtcgcgaccgtacgcgacgcggacgac
tggggcctcgacgcggctgcatatgaggtgccgtcccccgaagttgctctgaccacggac
gaagcgcgggcagatgccgaactcgccctctccgcggctgttctcaaatatgcacgccac
gcgcaaaccggccgcttgacgccgtcgagcgcccacaaactcttcgacttcaaccccagg
gcgcgcgatcccaagaccgtcttgacggagattgccgcgtcggacaccccggacaaggcg
ctgctcgcgctccatccgcaaagcgagcagtatcagcgcctgcatacggcgctggttcag
gcgcgggactcggcgaagcaggccggccgcaacccggacaacgaccggaccgttcagctc
attgccatcaacatggagcggtggcgctggctgccgtccgacctcggcaacttccacgtc
tggaacaacatcccggagttcaagttccgtgtcctgaagggcggccggacgatctacgag
gaaaagacgattgttgggcagacccaatacgccacggcctttttctccgcgccgatgcgg
aacatcgtcttcaatcccaattggacggtcccgccgacgatcgtgaaagaagacatcgca
ccgaagttgaagggcccgcagcgctcaggcggcttgtttggcgggcgggaatcccggaac
aggatgctgagccgctacggcttgaaggtcagcaagggcggcaagcctgtcgatgcggac
gccgtggattggcagaccgtcaatgtgcacgcctacacgttccagcaggatccggggccg
cacaatgtgctcggccagttcaagttcaactttccgaacaagcacgcgatctatatgcac
gacacgacgcagaaggagctgttcgggcgccgggtccggacgctgagtcacgggtgtatc
cgcgtcaatcagccggcccgcttcgcggctttccttctgaacgaggacaagggctggtcc
atgggcacggtccaagacatcctggcccgcgcccaaggccagacgaaggtgatcgcgctc
gatcacaagattccggtccatctcacctacaatacggccatcgccgacggctatggctcc
atccgtgaattcggcgacgtgtacggcatcgacaaccgtatggcggcgaagctcttcaag
aatccggcgcacttcaacgtgccggtatccgggccggaggttgccgagacatcgcccacc
cagcggtattcggagccgcgtccacgcaggcggcgcaccgcgaacagcgtcgacgacttc
atctcgggaatcctcggcaattag
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