KEGG   Methyloceanibacter caenitepidi: GL4_0534
Entry
GL4_0534          CDS       T03636                                 
Name
(GenBank) ribonuclease D related protein
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mcg  Methyloceanibacter caenitepidi
Brite
KEGG Orthology (KO) [BR:mcg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mcg03016]
    GL4_0534
Enzymes [BR:mcg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     GL4_0534
Transfer RNA biogenesis [BR:mcg03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    GL4_0534
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: BAQ15999
UniProt: A0A0A8K1X5
LinkDB
Position
556738..557358
AA seq 206 aa
MSQSSTVELFKGDLPPGRFTAKAIAVDTETLGLNPHRDRLCLVQLSDGDGTAALVQISPD
DDAPELKRLLADDSVLKIFHYARFDVAVLKHYLGVDTAPIYCTKIASKLARTYTDRHGLK
DLCRELLGIELSKQQQSSDWGADTLSPDQLSYAASDVLYLHALKERLDAMLDREGRAQFA
RACFAFLPVRAELDLKGWSEMDIFAH
NT seq 621 nt   +upstreamnt  +downstreamnt
ttgagccagtcctcgaccgtagaactcttcaagggtgatttgccgccgggccgcttcacg
gccaaggcgatcgcggtcgacaccgagacgctcggcctcaatccgcatcgcgaccgtctg
tgcctggtgcaactctccgatggcgatggcacggccgcgctggtgcagatttctccagac
gacgacgcacccgagctgaagcgcctgctggccgacgacagcgtactcaagatcttccac
tacgcgcgtttcgacgtagccgtgctgaagcactatctcggcgtcgacacggcgccgatc
tactgcaccaagatcgcctcgaaattggctcgcacctatacggatcggcacggtctgaaa
gatctgtgccgggagctcctagggatcgagttgtctaagcagcagcaatcatccgactgg
ggcgcggacacgttgagccccgaccagctcagctacgcggccagcgacgtgctgtatctg
catgccctcaaggagcggctggatgcgatgctcgaccgcgagggccgggctcagttcgcg
cgtgcctgtttcgcgtttctgccggtccgggccgaactggacctcaaaggctggtccgaa
atggacatcttcgcccattga

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