Methyloceanibacter caenitepidi: GL4_0686
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Entry
GL4_0686 CDS
T03636
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mcg
Methyloceanibacter caenitepidi
Pathway
mcg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GL4_0686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcg03400
]
GL4_0686
Enzymes [BR:
mcg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GL4_0686
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GL4_0686
DNA repair and recombination proteins [BR:
mcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GL4_0686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BAQ16149
UniProt:
A0A0A8K2C1
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All DBs
Position
complement(699755..700654)
Genome browser
AA seq
299 aa
AA seq
DB search
MPELPEVETVRRGLEPVLVGNAFARVEQRRPDLRFPLPARFAERLTGRAIEGLDRRAKYL
LARLDDGQVLIMHLGMTGRFAIEKAGAGKTAPGDFVHDPSPSAAFGFPKHEHIVFHLGDG
STVRYSDVRRFGIMDLAAAGELESHALFKGLGIEPLGEELTPEWLAGRLKGKTTPIKSAL
LDQRLIAGLGNIYVCEALHRAGLSPERAAGTLATKTGRPTAKTGALVAAITSVLHDAIRA
GGSSLRDYRHTDGRLGRFQHRFQTYGREDARCMRDACDGTIRRIAQGGRSTFYCPICQR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcctgaagtcgagaccgtgcgccggggattggagcccgtgctggtggga
aacgcgttcgcgcgcgtggagcagcgccggccggacttacgctttcccctgcccgcgcga
ttcgccgagcgtctgacgggccgcgccatcgaggggctggaccggcgcgcgaaatatctc
ctggcgcgtttggacgacggccaggtactgatcatgcatctcggcatgaccggccgcttc
gcgattgagaaggcgggcgccggcaagacagcgcctggcgacttcgtgcacgacccgagc
ccgtcggccgccttcggctttcccaagcacgagcatatcgtcttccacttgggcgatggc
tcgaccgtccgctattccgacgtgcgccgattcggcatcatggatcttgcggcagccggg
gagctcgagtcacacgcgctcttcaagggcctcggaatcgaaccgctgggagaggagctg
acgcccgaatggcttgcggggcggctgaagggcaagaccacgccgatcaaatcggcgctt
ctggaccagcgcctcatcgccgggctcggaaacatctatgtttgcgaggcgctccatcgc
gcgggtctgtcgcccgagcgggccgcaggcacgctcgccacgaagacgggccgcccgact
gccaagacgggcgcgctggtcgcggccatcacctccgtcctgcacgacgccattcgcgcg
ggcggttcctccttgcgcgactaccgccatacggacgggcggctgggccgtttccagcac
cgcttccaaacctatggacgggaggacgcgcgctgcatgcgagacgcctgcgacggcacg
atccgccggatcgcgcagggcgggcgctcaaccttctactgtccaatctgccaaagataa
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