Methyloceanibacter caenitepidi: GL4_0700
Help
Entry
GL4_0700 CDS
T03636
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mcg
Methyloceanibacter caenitepidi
Pathway
mcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GL4_0700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcg03019
]
GL4_0700
03016 Transfer RNA biogenesis [BR:
mcg03016
]
GL4_0700
Enzymes [BR:
mcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GL4_0700
Messenger RNA biogenesis [BR:
mcg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GL4_0700
Transfer RNA biogenesis [BR:
mcg03016
]
Prokaryotic type
tRNA degradation factors
GL4_0700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAQ16163
UniProt:
A0A0A8JZB8
LinkDB
All DBs
Position
complement(712901..715021)
Genome browser
AA seq
706 aa
AA seq
DB search
MFDKHTVEIEWARRPLKLETGRVARQADAAVLATYGETCVLATVVAAKEARPGIDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLTSRLIDRPIRPLFAKGFKNDTQVITTVLSH
DMENDPDIVAMVAASAALTLSGVPFLGPIGAARVGYVEGKYILNPLVDEMPETSLDLVVA
GTKDAVLMVESEANELPEDIMLGAVMYGHEHFQPVIDAIVKLAEVAAKEPWELKAEDDSE
MVAKVSELADAGLRDAYAIVSKPERRDSIAQVKEKVVSALVPEDDDGSIAAKVAGAFKKA
EQDVVRGSILDTKKRIDGRDLVTVRPIVCEVGVLPRTHGSALFTRGETQALVVTTLGTGD
DEQFVDALQGTYKEKFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAVHPILPDHEQ
FPYTLRVVSEITESNGSSSMATVCGSSLALMDAGVPLKRPVAGIAMGLIKEGEKFAVLSD
ILGDEDHLGDMDFKVAGTSEGVTSLQMDIKITGITEEIMKIALDQAKDGRMHILGEMDKA
LNEARPELGEYAPRIETIQIPTDKIREVIGSGGSVIREIVAESGAKIDISDDGTVKIASA
NAESIRQAIARIKSIAAEPEVGEIYRGKVVKCMEFGAFVNFFGPRDGLVHISQLAEGRPK
TVGDVVKEGDEVWVKLLGFDERGKVRLSMKVVDQETGKEKEVAEAG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataaacacactgtagaaattgaatgggcccggcgcccgctcaaactcgagacc
gggcgcgtcgcgcgccaggccgatgccgccgtcctcgcgacttatggcgagacttgcgtt
cttgcgaccgttgtcgccgcgaaagaagcacggcccgggatcgacttctttcctttgacc
gtgaattaccaagaaaagaccttcgccgccggtaagattcccggcggttattttaagcgc
gaagggcgtccgaccgagaaggaaaccctcacctcgcgcctgatcgaccgtccgatccgc
ccgctcttcgccaagggcttcaagaacgacacccaggtcatcaccaccgtgctctcgcac
gacatggagaacgatcccgatatcgtggccatggtcgcggcctctgcggcgctgaccctg
tcgggcgttccgttcctcggacccatcggcgccgcgcgcgtcggctatgtcgagggcaag
tacatcctgaacccgctggtcgacgagatgcctgaaacctcgctcgacctcgtggtcgca
ggcaccaaagacgccgttctgatggtggagtccgaagccaacgagcttcccgaagacatc
atgctcggcgcggtgatgtacggacacgagcacttccaacccgtgatcgacgccatcgtc
aagctggccgaggttgccgccaaggagccgtgggagctgaaggccgaagacgattcggag
atggtggccaaggtcagcgaactggccgatgccggtctccgcgacgcctacgccatcgtc
tccaagccggagcggcgcgacagcatcgcccaggtcaaggagaaggtcgtttccgcgctc
gtccccgaggacgatgacggctcgatcgccgccaaagtcgccggcgccttcaagaaagcc
gagcaggacgtcgtgcgcggcagcattctcgacaccaagaagcgtatcgacggccgcgat
ctcgtgaccgtccggccgatcgtctgcgaagtcggcgttctgccccgtacccacggcagc
gcgctgttcacccgcggcgagacgcaggccctcgtcgtgacgacgctgggcacgggcgac
gacgagcagttcgtcgatgccctgcaggggacttacaaagagaagttcctgttgcactac
aacttcccgccttactccgtcggcgagaccggccgcatgggctctccggggcgtcgcgag
atcggccacggcaagcttgcctggcgggctgttcacccgatcctgccggatcacgagcag
ttcccctacacgctgcgcgtcgtttcggagatcaccgagtcgaacgggtcgtcttcaatg
gcgacggtctgtggctcgtcgctcgcgctgatggacgccggcgtgccgctcaaacggccc
gtcgccggtatcgctatgggactcatcaaggaaggcgagaagttcgccgtcctgtcggac
atcctgggcgatgaggatcatctcggcgacatggacttcaaggtggctggtacgtccgaa
ggcgtcacgtcgctccagatggacatcaagatcaccggcatcaccgaagagatcatgaag
atcgcgctggatcaggccaaagatgggcgcatgcacatcctcggtgagatggacaaggcg
ctgaacgaggcgcgtcccgagctcggcgaatacgccccgcgcatcgagacgatccagatc
ccgaccgacaaaatccgtgaggtcatcggctccggcggttccgtcatccgcgagatcgtc
gcggagtcgggcgccaagatcgatatctcggacgacggcacggtcaagatcgcttccgcc
aacgccgaatcgatccgccaggccatcgcccggatcaagtcgatcgcggcggaacccgag
gtcggcgagatttatcgcggcaaggtcgtcaagtgcatggagttcggcgctttcgtgaac
ttctttggcccgcgcgacggcctcgtgcacatctctcaactcgccgaaggccgtcccaag
accgttggggacgtggtcaaggaaggcgacgaggtctgggtcaagctgcttggcttcgac
gagcgcggcaaggtccgcctgtcgatgaaggtggtcgaccaggagaccggcaaggaaaag
gaagtcgcggaggccggctag
DBGET
integrated database retrieval system
