KEGG   Methyloceanibacter caenitepidi: GL4_1112
Entry
GL4_1112          CDS       T03636                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
mcg  Methyloceanibacter caenitepidi
Brite
KEGG Orthology (KO) [BR:mcg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcg03400]
    GL4_1112
DNA repair and recombination proteins [BR:mcg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GL4_1112
    Archaeal homologous recombinant proteins
     GL4_1112
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 AAA_21 MMR_HSR1 ABC_tran
Other DBs
NCBI-ProteinID: BAQ16570
UniProt: A0A0A8K0X3
LinkDB
Position
1151967..1155041
AA seq 1024 aa
MRPVRLTLQAFGPYPGKEVIDFRDAVEAGLFGIYGQTGSGKSTVFSAMTFALFGEPAKPE
QETPSLRSDHADADMQTEVELVFDMGGHRYVVARRPEQMRPKQRGVGETRHPHEAFLFDA
TGIAVDEIGGESRGKILAEKRVRDVDKAIIEMLGYGPEQFRQIVLLPQGKFEAFLAAKTK
ERLAILRDLFDVSAYRALSAKLKSDADTAERHVQDQRRVCSGRLGAEGFESLDALNDGID
AAGVHCSETAKVEEGARAGLLAAQTALGAAEKLEEQFKSLDLARETLAVLEAGQEAMDAL
AKRIVQAERARILLDVESNVSEADADAKNARHARNESQRLAEMASAKAKEAVTALEVETQ
RAGEMDEMRQNLEALDRHKEVLEKSTGLVEAVDRAREAKRQAGESLESAERRLAGLDKQH
QTNVDAIKAARQAEVHLRDSVARLEGLKRLLSAATNFEKAEVSVQVAHDELQVLTSTHAN
AARAAHEAKSEYAEAERALSEAQALHLAAKLEPGEPCPVCGSIEHPAPATGAAEHAGLDQ
AFRDTKAAFELADAAVHEAFASLEAGRVILAERQGILAAFDPPRESAAVLTEQIETEQLL
LEDAGPPRDIAAMEADGERLAEQIREATQVREECRDTLGKLQASAAAEQARLDQMLSAVP
QDLRDPAALAATRQKVAGGLAERQAARDAAEAMARETRDADLSTAKDLQAAAGKLTESQA
RHRKAEEAFAARLAQAGVTEDEFRALKPAIATVEEDRTTVNEHRRKLENANEEMHKTSEA
IQDRERPDLSVLQAAKLDADQKLTEAVDLRSGAQQRLAHLSKLKGDLEETLRELDALEAS
SGPLRALAALANGENPQRLDLETFAIGAMFDRVLEAANLRLGPMTGDRYRLMRNEESAGR
GRRGLEIEVFDIFTGKARPTSTLSGGETFIAALALALGLADVVESASGKVRLDTIFIDEG
FGSLDTENGSGTLDQVLQVLAKLVSQNRAVGLISHVSLVQEAIPNGFYVWKEVTGSHVEA
RGVN
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgagaccggtgaggctgaccttgcaggcgttcggcccatacccgggcaaggaagtcatc
gacttccgcgacgcggtcgaggctgggctgtttggtatctacggtcaaaccggttcgggg
aaatccacggtcttcagcgcaatgacattcgcgctatttggagagccggcgaagcccgag
caggagacgccgtcgttaaggtccgatcacgccgacgcggatatgcagacagaggtcgag
cttgtgttcgacatgggcggccatcgctatgtcgttgcgcgtcgcccggagcaaatgcgc
ccgaagcaacgtggagttggcgagacgcggcatccccacgaggcattcctgtttgacgcg
acaggaattgcggttgacgagatcggaggtgagagccgcggcaagatcttggctgaaaag
agggttcgcgatgttgataaggcgatcatcgaaatgctgggctatgggcccgagcagttc
cgccagatcgtacttctgccgcaggggaagttcgaggcgtttctcgcggcgaagacgaag
gaacggctcgcaatcctgcgggacctattcgatgtttctgcctatcgagccctgtcggcc
aagctgaagtcggatgcagacactgccgagcgccacgttcaggaccagcgcagagtctgc
agcggccgtcttggtgcggagggcttcgagagcctcgatgcgctgaacgatggaatcgat
gccgccggcgtgcactgctctgagactgcaaaagtggaagaaggcgcaagggccggtctc
ctcgcggctcagactgcgctgggagcagccgagaagctggaggagcaattcaagagcctc
gatctggcacgcgagacgctcgctgttcttgaagcgggccaagaggcaatggatgcgctt
gccaaacgaattgtccaggccgaacgcgccaggatcctgctcgatgtggaaagcaacgtg
agcgaggcggatgccgacgccaagaatgcgcggcatgcacggaacgaatcccagcgtctc
gcggagatggcgtctgcgaaggccaaggaggctgtgaccgcgcttgaggtcgaaacacag
cgcgcgggcgaaatggacgaaatgcgccagaatctcgaggcgttggaccgtcacaaggag
gtgctcgaaaagtccacgggactggtggaggcggttgatcgagcgcgcgaggccaagcgc
caggctggtgagagtctcgaaagcgctgaaagaagactggcgggcctcgataagcagcat
cagacgaatgtcgatgccatcaaagcggcgcgccaagcagaggtccatctccgggactct
gtggcgcggcttgagggcctgaagcgattgctctccgcggctacgaacttcgaaaaagcg
gaagtcagcgtgcaagtggctcatgacgagcttcaagtgctgacatcgacgcatgcaaat
gccgcccgagccgcgcatgaggccaagtccgagtacgcggaggcggaacgggcactctcc
gaggcccaggcgctgcacttggccgccaagctcgagcctggagagccctgtcctgtttgc
ggctcgattgaacatccggcaccggctaccggagccgccgagcatgccgggttggatcaa
gcgtttcgggacacgaaagctgcattcgagttggcggacgcagcagttcacgaagcgttt
gcaagtctcgaagcgggacgggtgatccttgcggagcggcaaggcatactcgcggcgttt
gatcctccccgtgaaagtgccgcggtgctcacggagcagattgagacggaacagctttta
ctagaagatgccggccccccacgcgacatcgctgcaatggaagccgacggtgagcgactt
gccgaacagattcgagaggccacgcaagtacgcgaggaatgccgcgatacactcggcaag
ctccaagcgagcgctgccgcggagcaagcgcgcctcgatcagatgctatcggcggttcca
caagatttgcgggacccggcagctctcgccgctaccaggcagaaggtcgccggaggccta
gcagagcggcaagctgcgcgagacgctgcagaggccatggcgagggaaacgcgcgatgcc
gatctttccaccgcgaaggatttgcaggcagctgcaggcaagctcacggaatctcaagcg
cgccaccgcaaggcagaagaagcattcgcagcgcgccttgcacaagccggtgtgacagag
gacgagttccgggccctcaagcccgctattgcgacggtcgaagaggatcgcacaacggtg
aatgagcatcgtcggaagcttgagaatgcgaatgaggagatgcacaagacctcggaggca
attcaggatcgagagcgtcctgatctatcggtactgcaagcggcgaagctggatgccgat
cagaagctgaccgaagccgtggacttgcgttccggggcgcagcaacgattggcccacctc
tcaaagctcaaaggcgatttggaggagaccctgcgcgagctcgacgcgttggaagcctcc
tcgggtccccttcgagccctcgccgcgcttgcgaacggcgagaacccgcaacggctcgac
ctggaaacgtttgccatcggcgcgatgttcgaccgggttttggaggcggctaatctgcgg
ctcggtcccatgacgggagaccgctacaggttgatgcggaatgaggaaagtgctggccgc
gggcggcgcggccttgagatcgaagttttcgatatcttcacgggcaaggcgcgcccaacc
agcacgttgtcgggcggagagacgtttatcgccgctctcgctctcgcgctcgggctcgcc
gacgtcgtcgaaagtgcgagcgggaaggtccggctggatacaattttcattgatgagggc
ttcggcagtctagacaccgagaacggttcaggcacgctcgatcaggtcctgcaagtgctt
gccaagctcgtcagtcagaaccgcgcggtgggcctcatctcgcatgtctcccttgtgcag
gaagccattccaaatggcttctatgtttggaaggaagtcacgggaagccacgtagaggcc
aggggggtgaattga

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