Methyloceanibacter caenitepidi: GL4_1112
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Entry
GL4_1112 CDS
T03636
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mcg
Methyloceanibacter caenitepidi
Brite
KEGG Orthology (KO) [BR:
mcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcg03400
]
GL4_1112
DNA repair and recombination proteins [BR:
mcg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GL4_1112
Archaeal homologous recombinant proteins
GL4_1112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
MMR_HSR1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAQ16570
UniProt:
A0A0A8K0X3
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All DBs
Position
1151967..1155041
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AA seq
1024 aa
AA seq
DB search
MRPVRLTLQAFGPYPGKEVIDFRDAVEAGLFGIYGQTGSGKSTVFSAMTFALFGEPAKPE
QETPSLRSDHADADMQTEVELVFDMGGHRYVVARRPEQMRPKQRGVGETRHPHEAFLFDA
TGIAVDEIGGESRGKILAEKRVRDVDKAIIEMLGYGPEQFRQIVLLPQGKFEAFLAAKTK
ERLAILRDLFDVSAYRALSAKLKSDADTAERHVQDQRRVCSGRLGAEGFESLDALNDGID
AAGVHCSETAKVEEGARAGLLAAQTALGAAEKLEEQFKSLDLARETLAVLEAGQEAMDAL
AKRIVQAERARILLDVESNVSEADADAKNARHARNESQRLAEMASAKAKEAVTALEVETQ
RAGEMDEMRQNLEALDRHKEVLEKSTGLVEAVDRAREAKRQAGESLESAERRLAGLDKQH
QTNVDAIKAARQAEVHLRDSVARLEGLKRLLSAATNFEKAEVSVQVAHDELQVLTSTHAN
AARAAHEAKSEYAEAERALSEAQALHLAAKLEPGEPCPVCGSIEHPAPATGAAEHAGLDQ
AFRDTKAAFELADAAVHEAFASLEAGRVILAERQGILAAFDPPRESAAVLTEQIETEQLL
LEDAGPPRDIAAMEADGERLAEQIREATQVREECRDTLGKLQASAAAEQARLDQMLSAVP
QDLRDPAALAATRQKVAGGLAERQAARDAAEAMARETRDADLSTAKDLQAAAGKLTESQA
RHRKAEEAFAARLAQAGVTEDEFRALKPAIATVEEDRTTVNEHRRKLENANEEMHKTSEA
IQDRERPDLSVLQAAKLDADQKLTEAVDLRSGAQQRLAHLSKLKGDLEETLRELDALEAS
SGPLRALAALANGENPQRLDLETFAIGAMFDRVLEAANLRLGPMTGDRYRLMRNEESAGR
GRRGLEIEVFDIFTGKARPTSTLSGGETFIAALALALGLADVVESASGKVRLDTIFIDEG
FGSLDTENGSGTLDQVLQVLAKLVSQNRAVGLISHVSLVQEAIPNGFYVWKEVTGSHVEA
RGVN
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagaccggtgaggctgaccttgcaggcgttcggcccatacccgggcaaggaagtcatc
gacttccgcgacgcggtcgaggctgggctgtttggtatctacggtcaaaccggttcgggg
aaatccacggtcttcagcgcaatgacattcgcgctatttggagagccggcgaagcccgag
caggagacgccgtcgttaaggtccgatcacgccgacgcggatatgcagacagaggtcgag
cttgtgttcgacatgggcggccatcgctatgtcgttgcgcgtcgcccggagcaaatgcgc
ccgaagcaacgtggagttggcgagacgcggcatccccacgaggcattcctgtttgacgcg
acaggaattgcggttgacgagatcggaggtgagagccgcggcaagatcttggctgaaaag
agggttcgcgatgttgataaggcgatcatcgaaatgctgggctatgggcccgagcagttc
cgccagatcgtacttctgccgcaggggaagttcgaggcgtttctcgcggcgaagacgaag
gaacggctcgcaatcctgcgggacctattcgatgtttctgcctatcgagccctgtcggcc
aagctgaagtcggatgcagacactgccgagcgccacgttcaggaccagcgcagagtctgc
agcggccgtcttggtgcggagggcttcgagagcctcgatgcgctgaacgatggaatcgat
gccgccggcgtgcactgctctgagactgcaaaagtggaagaaggcgcaagggccggtctc
ctcgcggctcagactgcgctgggagcagccgagaagctggaggagcaattcaagagcctc
gatctggcacgcgagacgctcgctgttcttgaagcgggccaagaggcaatggatgcgctt
gccaaacgaattgtccaggccgaacgcgccaggatcctgctcgatgtggaaagcaacgtg
agcgaggcggatgccgacgccaagaatgcgcggcatgcacggaacgaatcccagcgtctc
gcggagatggcgtctgcgaaggccaaggaggctgtgaccgcgcttgaggtcgaaacacag
cgcgcgggcgaaatggacgaaatgcgccagaatctcgaggcgttggaccgtcacaaggag
gtgctcgaaaagtccacgggactggtggaggcggttgatcgagcgcgcgaggccaagcgc
caggctggtgagagtctcgaaagcgctgaaagaagactggcgggcctcgataagcagcat
cagacgaatgtcgatgccatcaaagcggcgcgccaagcagaggtccatctccgggactct
gtggcgcggcttgagggcctgaagcgattgctctccgcggctacgaacttcgaaaaagcg
gaagtcagcgtgcaagtggctcatgacgagcttcaagtgctgacatcgacgcatgcaaat
gccgcccgagccgcgcatgaggccaagtccgagtacgcggaggcggaacgggcactctcc
gaggcccaggcgctgcacttggccgccaagctcgagcctggagagccctgtcctgtttgc
ggctcgattgaacatccggcaccggctaccggagccgccgagcatgccgggttggatcaa
gcgtttcgggacacgaaagctgcattcgagttggcggacgcagcagttcacgaagcgttt
gcaagtctcgaagcgggacgggtgatccttgcggagcggcaaggcatactcgcggcgttt
gatcctccccgtgaaagtgccgcggtgctcacggagcagattgagacggaacagctttta
ctagaagatgccggccccccacgcgacatcgctgcaatggaagccgacggtgagcgactt
gccgaacagattcgagaggccacgcaagtacgcgaggaatgccgcgatacactcggcaag
ctccaagcgagcgctgccgcggagcaagcgcgcctcgatcagatgctatcggcggttcca
caagatttgcgggacccggcagctctcgccgctaccaggcagaaggtcgccggaggccta
gcagagcggcaagctgcgcgagacgctgcagaggccatggcgagggaaacgcgcgatgcc
gatctttccaccgcgaaggatttgcaggcagctgcaggcaagctcacggaatctcaagcg
cgccaccgcaaggcagaagaagcattcgcagcgcgccttgcacaagccggtgtgacagag
gacgagttccgggccctcaagcccgctattgcgacggtcgaagaggatcgcacaacggtg
aatgagcatcgtcggaagcttgagaatgcgaatgaggagatgcacaagacctcggaggca
attcaggatcgagagcgtcctgatctatcggtactgcaagcggcgaagctggatgccgat
cagaagctgaccgaagccgtggacttgcgttccggggcgcagcaacgattggcccacctc
tcaaagctcaaaggcgatttggaggagaccctgcgcgagctcgacgcgttggaagcctcc
tcgggtccccttcgagccctcgccgcgcttgcgaacggcgagaacccgcaacggctcgac
ctggaaacgtttgccatcggcgcgatgttcgaccgggttttggaggcggctaatctgcgg
ctcggtcccatgacgggagaccgctacaggttgatgcggaatgaggaaagtgctggccgc
gggcggcgcggccttgagatcgaagttttcgatatcttcacgggcaaggcgcgcccaacc
agcacgttgtcgggcggagagacgtttatcgccgctctcgctctcgcgctcgggctcgcc
gacgtcgtcgaaagtgcgagcgggaaggtccggctggatacaattttcattgatgagggc
ttcggcagtctagacaccgagaacggttcaggcacgctcgatcaggtcctgcaagtgctt
gccaagctcgtcagtcagaaccgcgcggtgggcctcatctcgcatgtctcccttgtgcag
gaagccattccaaatggcttctatgtttggaaggaagtcacgggaagccacgtagaggcc
aggggggtgaattga
DBGET
integrated database retrieval system