Methyloceanibacter caenitepidi: GL4_2089
Help
Entry
GL4_2089 CDS
T03636
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcg
Methyloceanibacter caenitepidi
Pathway
mcg03030
DNA replication
mcg03430
Mismatch repair
mcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GL4_2089
03430 Mismatch repair
GL4_2089
03440 Homologous recombination
GL4_2089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcg03032
]
GL4_2089
03400 DNA repair and recombination proteins [BR:
mcg03400
]
GL4_2089
Enzymes [BR:
mcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GL4_2089
DNA replication proteins [BR:
mcg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GL4_2089
DNA repair and recombination proteins [BR:
mcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GL4_2089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
BAQ17532
UniProt:
A0A0A8K4Q2
LinkDB
All DBs
Position
2171894..2175355
Genome browser
AA seq
1153 aa
AA seq
DB search
MSDQQPFVHLHVHSAYSLLEGALKIPKLVELAKADAAPALALTDSNNLFGALEFSEAVSG
AGIQPIIGCTLNLTFEKPGKKGGAPELVNQTPDGRIALLAKDETGYANLMELTSRAYFTA
AETGDAFVTIDELAGHSRGLIALSGGPEGLIDTAFADGNAELARARVEALHSIFGDCFYI
ELQRHGLAQERAVEPHLVQLAYERSIPLVATNEPFFATSDDFEAHDALICIAQGSYVAVD
DRRRLSPEHYFKSADEMRALFADLPEAIENTVEIARRCAYRPQKRSPILPAFLSGGEASA
ALAETEAEELKRQAEDGLAARIAQHGTAPGADEAAYRERLAFELEIITRMNYQGYFLIVS
DFIKWTKGQGIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDID
FCQDRRDEVIAYVRDRYGADRVAQIITFGKLQARAVLRDVGRVLQMPYGQVDRLCKLVPM
NPANPVTLPQAIAGEPRLQEERDKEPIVAKLLDIGQRLEGLYRHASTHAAGVVIADRNLT
ELVPLYRDARAQLPATQFNMKWAEAAGLVKFDFLGLKTLTVIDMTRRLIGRDGPDIDPAE
IPLDDTRTYELIQRAETVGVFQLESQGMRDALRKLKPDRFEDIIAMVALYRPGPMDNIET
FVNRKHGKEEIETLHPMIEPILAETYGVIIYQEQVMQIAQVLSGYSLGEADLLRRAMGKK
IKAEMDKQRKRFVDGAVANGVEKGRAEYIFELVAKFAGYGFNKSHAAAYALIAYQTAYLK
ANYPTEFVAASMTLDMGNADKLNSFAQEARRLGIKLEQPSVNHSEVGFIPNGKAIRYSLA
ALKNVGQPAVESIVAERNANGLFGDISDFARRLNPRHVNKRALETLATAGAFDELGIDRA
TALENVDRMILAGNSAQEARTGGQNDLFFSGGNQTPPPIELRKADPWLPTDRLAKEFEAV
GFFLTGHPLDEYSEVLKSLGVETWTEFAAKAQTKRVVGRLAGTVLSSRERKGKTGNPYAF
VAFSDATGQFEAVIFSEALIAGRPLLEAGSVVLLDVEAEADGENVRVRVQGLSSLDNTAE
ERSSGMEVTVDDPRALSLLAAQIGAEGGQGRLRLRLLIDGKEVEFDLPQGIDSTPRQRSA
LKLLEGVLDVSAI
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccagcaacccttcgtgcacctgcacgtgcattccgcctattccttgctggaa
ggcgcgctcaagattccgaagctcgtcgaactggccaaggccgacgcggcgccggccctg
gcgctcaccgattccaacaatttgttcggcgcactcgaattctccgaagcggtctcgggc
gccggcattcagcccattatcggctgcacgctgaacctcaccttcgagaagcccggcaag
aagggaggggccccggagctggtcaaccagacccccgacggccgcatcgcgctcctggcc
aaggacgagaccggctacgccaacctgatggagctgacgagccgcgcctacttcacggca
gccgagacaggggacgccttcgtcaccatcgatgaactggcggggcattcacgcggtttg
atcgcgctcagcggcggcccggagggcctcatcgacacggccttcgcggatgggaacgcg
gagcttgcccgtgcccgcgtcgaggcgctccattcgatctttggagactgcttctacatc
gagctccaacgccatggtctggctcaggaaagggccgtcgagccccacctggtgcaactg
gcctatgaacgctcgatcccgcttgtggcgaccaatgagccgttctttgccacctcggac
gatttcgaggcccatgacgcgctgatctgtatagcgcaaggaagctacgtggccgtggac
gaccgccgccgcctcagccccgaacactacttcaagtccgcggacgaaatgcgggccctg
ttcgcggacctgcccgaggccattgaaaacacggtcgagatcgcccggcgttgcgcctat
cgcccgcagaaacgcagcccgatcctgccggcgtttctttccggcggcgaggcaagcgcg
gcccttgcggagaccgaagccgaggagctgaaaaggcaggcggaagacggccttgccgcg
cgcatcgcacagcacggaacagccccgggcgcggacgaagcggcctatcgcgagcggctc
gccttcgaactcgagatcatcacccgcatgaactatcagggctacttcctgatcgtttcg
gacttcatcaaatggaccaaggggcagggcatcccggtaggcccggggcgcgggtccggc
gcgggttcgctcgtcgcatatgcgctgacaatcaccgatctcgaccccatccgcttcggg
ctcctgttcgagcgcttcctgaacccggaacgcgtgtccatgcccgacttcgatatcgac
ttctgccaggaccgccgcgacgaggtcatcgcctatgtgcgcgaccgctacggggccgac
cgggtcgcgcagatcatcaccttcggtaagctccaggcccgcgccgtgctgcgcgatgtg
ggccgcgtgctgcagatgccgtacgggcaggtcgaccggctctgcaagctcgtccctatg
aacccggcgaacccggtcacgttgcctcaagccatcgccggcgaaccgcgcttgcaggag
gagcgcgacaaggagccgatcgtcgccaaactgctcgacatcggccagcggctcgagggc
ctctaccggcacgcttcgacccacgcggcgggcgtcgtgatcgcggatcggaacctgacc
gaactcgtgccgctctatcgtgacgcgcgcgcccaactcccggccacccagttcaacatg
aaatgggccgaagcagccgggctggtgaagttcgacttcctcgggctcaagacgctgacc
gtcatcgacatgacgcggcggctgattggccgcgacgggcccgatatcgatccggcggag
atcccactcgacgacaccaggacctacgagttgatccagcgggcggagacggtgggcgtg
ttccagctggaaagccagggcatgcgcgacgccttgcgcaagctgaagcccgaccggttc
gaagacatcatcgccatggtcgcgctctaccggccaggcccgatggacaatatcgagacc
ttcgtgaaccggaagcacggcaaggaggagatcgagacactccatcccatgatcgagccc
atcctggcggagacctacggcgtcatcatctaccaggagcaggtgatgcagatcgcacag
gttctgtccggctactccctcggagaggccgatctgctgcgccgggccatgggcaagaag
atcaaggccgagatggacaagcagcggaagcgctttgtcgacggcgcggtcgcgaacggc
gtggagaagggccgggcggaatacatatttgaactggtggcgaagttcgccggctacggc
ttcaacaagtcacacgcggcggcctatgcgctgatcgcctaccagaccgcctatctcaag
gcgaactacccgaccgaattcgttgcggcatccatgacgctggacatgggcaacgccgac
aagctcaacagcttcgcgcaagaggcgcggcggctcggcatcaagctcgagcagccgtcg
gtgaaccactccgaagtcggcttcatccccaatggcaaggcgatccgctactcccttgcg
gcgcttaagaatgtcggccaacctgctgtcgagtccatcgtggcggagcggaacgccaac
ggcctgttcggcgacatctccgacttcgcacgccgcttgaacccgcgccacgtaaacaag
cgcgccttggagacactcgcgactgccggcgctttcgacgagctcggtatcgaccgggcc
acggcgctcgagaacgtggaccggatgatcctcgccgggaacagcgcccaggaagctcgt
accggcggccagaacgatctgttcttctccggcggcaatcagaccccgccgccgatcgag
ctgcgcaaggcggatccctggctcccgacggaccggcttgccaaagagttcgaggccgtg
ggcttcttcctgaccgggcacccgctcgacgaatacagcgaagttctcaagtctcttggc
gtggagacctggaccgaatttgcggcaaaggcgcagacgaagcgggtcgtgggcaggctc
gccgggacggttctctcctcgcgcgaacgcaaaggcaagaccggtaacccctatgcgttc
gttgctttttccgacgccaccgggcagttcgaggccgtgatcttctcagaagcgttgatt
gccggccgtccgctcctcgaggcaggatcggtggttctcctcgacgtggaagccgaagcg
gacggagaaaacgtgcgcgtccgggttcaggggctgtcgtccctggacaacaccgccgaa
gagcgctcctcgggcatggaagtcactgtcgacgatccccgagccctctcgctgcttgct
gcgcagataggcgccgagggcgggcaagggcggcttcgcctccggctcctcatcgacggc
aaggaggtcgagttcgatctgccgcaagggatcgattccaccccccgccagcgcagcgcg
ctcaagctcttggagggggtcctggacgtcagcgcgatctag
DBGET
integrated database retrieval system
