KEGG   Methyloceanibacter caenitepidi: GL4_2284
Entry
GL4_2284          CDS       T03636                                 
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mcg  Methyloceanibacter caenitepidi
Pathway
mcg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mcg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GL4_2284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcg03021]
    GL4_2284
   03400 DNA repair and recombination proteins [BR:mcg03400]
    GL4_2284
Enzymes [BR:mcg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GL4_2284
Transcription machinery [BR:mcg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GL4_2284
DNA repair and recombination proteins [BR:mcg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GL4_2284
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L IDH HHH_XRCC3_RpoA
Other DBs
NCBI-ProteinID: BAQ17725
UniProt: A0A0A8K487
LinkDB
Position
complement(2369877..2370962)
AA seq 361 aa
MLDEDIRIPEPQAPNNDQERATPVLQKNWQDLIKPTKLNVTPGRDPARYATVVAEPLERG
FGLTLGNALRRVLLSSLQGAAITSVHIDGVLHEFSSIPGVREDVTNIVLNIKEIAVNQHS
EGVKRMVLQKEGPGIATAGDIQGGSDVEILNPEHVICTLDEGAAIHMEFTSASGKGYVPA
ERNRPDDAPIGFIPVDSLFSPVRKVSYRVENTREGQILDYDKLTMNIETDGSVRPEDTIA
LAARIIQDQLSVFVNFEEPKKEQTFQQQPELVFNAALLKKVDELELSVRSANCLKNDNIV
YIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLASMGLHLGMDVPDWPPENIEELAKRFEDH
Y
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgctggacgaagacattcgtattccggagcctcaggctccaaacaacgatcaagaaagg
gcgacaccggtgctgcaaaagaactggcaagatctcatcaagcccaccaagctcaacgtc
acccccggccgcgatccggcacggtatgcgactgttgtcgccgagccgctcgagcgcggc
ttcggcctgacgctcggcaatgcgctgcgtcgtgtgctcctgtcttcgcttcagggtgcg
gccatcacgtccgtccatatcgatggcgtgttgcacgagttctcgtccattccgggcgtg
cgtgaggacgtgaccaacatcgtcctcaacatcaaggaaatcgcggtcaaccagcattcc
gaaggcgtgaagcgcatggtgcttcagaaggaaggccccggcattgcgacggctggcgac
attcagggcggttccgatgtcgagatcctgaacccggagcacgtcatctgcacgctcgat
gaaggcgccgctatccacatggagttcacctccgcgtccggcaagggctatgtgccggcc
gagcggaaccgcccggacgatgcgccgatcggcttcattcccgtggactcgctgttcagc
ccggtgcgcaaggtctcctaccgggtcgagaacactcgcgaggggcagatcctcgactac
gacaagctcaccatgaatatcgagacggacggttcggttcgccccgaagacacgatcgcg
ctcgcggcgcgtatcattcaggatcagctctcggtcttcgtgaacttcgaagagccgaag
aaggagcagacgttccagcagcagccggagctggtgttcaacgccgcgctgctcaagaag
gtcgacgagctggaactgtcggtccgttcggccaactgcctgaagaacgacaacatcgtt
tacatcggcgaccttatccagaagacggaagcagagatgctgcggacaccgaacttcggc
cgcaagtcgctgaacgagatcaaggaggtcctggcctccatgggcctgcatctgggcatg
gacgtgccggattggccgccggagaacatcgaagagcttgctaagcgcttcgaggatcat
tactag

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