Methyloceanibacter caenitepidi: GL4_2933
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Entry
GL4_2933 CDS
T03636
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mcg
Methyloceanibacter caenitepidi
Brite
KEGG Orthology (KO) [BR:
mcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcg03021
]
GL4_2933
Transcription machinery [BR:
mcg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GL4_2933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
HTH_3
GntR
DnaB_bind
THR4_C
Motif
Other DBs
NCBI-ProteinID:
BAQ18365
UniProt:
A0A0A8K662
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All DBs
Position
2971185..2972084
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AA seq
299 aa
AA seq
DB search
MASKSLPSVSAHGGLTRYLEEIRQFPMLEPQQEYMLAKSWREHGDRDAAHELVTSHLRLV
ARIAMGYRGYGLPIGEVISEGNVGLMQAVKRFDPEKGFRLATYAMWWIRAAIQEYILRSW
SLVKMGTTAAQKKLFFNLRKIKGQLKALEDGDLRPDQVKQIATRLGVSEDDVVSMNRRLG
GDSSLNAPVRNDAESGEWMDWLVDDTAVDQETALAESEEQEQRRGMLHDALKGLNERERR
VFEARRLSEDPLTLEQLSTEFGVSRERIRQIEVRAFEKVQKAVQKAAAAAEEPELEPAD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaagagcttaccgagcgtcagcgcgcatggcggactgacgcgctatctagaa
gaaattagacagtttccgatgctggagccgcagcaggagtacatgcttgccaagagctgg
cgcgagcatggcgatcgcgatgcggcgcacgaactggtgacgtcccatttgcggctcgtg
gcgcgcatcgccatgggctatcgcggctatggcctcccgatcggcgaagtgatctctgaa
ggcaacgtgggcctgatgcaggccgtgaagcgtttcgaccccgagaagggcttccgcttg
gcgacctacgccatgtggtggatccgcgcggcgatccaggagtacatcctgcgttcgtgg
agccttgtgaagatgggcaccacggcggcgcagaaaaagctgttcttcaatctccgcaag
atcaagggacagctcaaggcgctggaggatggcgatctgcgtcccgatcaggtgaagcag
atcgcgacgcggcttggcgtcagcgaagacgacgtcgtgtccatgaaccgccggctcggc
ggcgactcctccctcaatgcgccggtgcgcaacgacgcggaaagcggcgagtggatggat
tggctcgtggacgacaccgcggtcgatcaggaaaccgcgctggccgagtccgaggagcag
gaacagcgccgcggcatgctgcacgacgcgctcaaggggttgaacgagcgggagcgccgc
gtgttcgaggcgcgccgcctgtccgaagacccgctgaccctggagcagctctccaccgag
ttcggcgtcagccgcgaacgcatccgccagattgaggtccgcgccttcgaaaaggtgcag
aaggccgtccagaaggccgccgccgctgccgaggagccggagctcgaacccgccgactag
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