Methylorubrum extorquens CM4: Mchl_0003
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Entry
Mchl_0003 CDS
T00809
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03030
DNA replication
mch03430
Mismatch repair
mch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mchl_0003
03430 Mismatch repair
Mchl_0003
03440 Homologous recombination
Mchl_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mch03032
]
Mchl_0003
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_0003
Enzymes [BR:
mch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mchl_0003
DNA replication proteins [BR:
mch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mchl_0003
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mchl_0003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ACK80973
LinkDB
All DBs
Position
3266..4387
Genome browser
AA seq
373 aa
AA seq
DB search
MRVTVERAALLKSLGHVHRVVERRNTIPILSNVLLRTGENGLQLKATDLDIEVTETVAAD
VLDAGATTVPAHVIYDIVRKLPEGAQVSLETSGETGQMTIRSGRSRFALGALPEGDFPDL
AAGELPHSFAIPAAELKQLIEKTQFAISTEETRYYLNGIYFHTLEVEGALKLRAVATDGH
RLARVETEAPEGSRGMPGIIVPRKAVAEIQKLVDDGGESVQVELSPAKIRLTFAGGVILI
SKLIDGTFPDYQRVIPTGNDKRLTVERDAFAKAVDRVSTISSERGRAVKLAVSEGRLALS
VTNPDAGSATEELDVDYEASALDIGFNARYLLDITAQLQGDTALFKLADPGSPTLIQDRD
GAPALYVLMPMRV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcacagtcgagcgcgcggccctcctgaaatcgctcggccacgtgcaccgggtg
gtggagcggcgcaacacgattccgatcctctccaacgtcctgctgcgcaccggcgagaac
ggcctccagctcaaggcgaccgacctcgatatcgaggtgaccgagaccgtggccgccgac
gtgctcgatgccggcgccaccacggtgccggcccacgtcatctacgatatcgttcgcaag
ctgcccgagggcgcgcaggtctcgctggagacctccggtgagacgggccagatgacgatc
cgttccggccgctcgcgcttcgcgctgggcgccctgccggagggcgatttccccgatctc
gccgcgggcgagctgccgcattcgttcgccattccggcggccgagctgaagcagctcatc
gagaagacgcagttcgcgatttccaccgaggagacgcgctactacctcaacggcatctac
ttccacaccctcgaggtcgagggtgccttgaagctgcgcgccgtggcgaccgacgggcac
cggctcgcccgcgtcgagaccgaggcgcccgagggcagccgcgggatgccgggcatcatc
gtgccgcgcaaagccgtcgccgagatccagaagctcgtcgacgacggcggcgagagcgtg
caggtcgagctgtccccggccaagatccgcctgacgtttgcgggcggcgtgatcctgatc
tcgaagctgatcgacggcaccttccccgactatcagcgggtgattcccaccggcaacgac
aagcgcctgacggttgagcgcgacgccttcgcgaaggcggtggaccgcgtctcgaccatt
tcctccgagcgcggccgcgccgtgaagctcgccgtgagcgaggggcgccttgccttgtcc
gtgaccaacccggatgccggttcggcgaccgaggagctcgatgtcgattacgaggcctcc
gccctcgatatcggcttcaatgcccgctatctgctcgacatcaccgcgcagctccagggc
gatacggccctgttcaagctcgccgatccgggctcgccgacgctgatccaggaccgcgac
ggcgccccggctctttatgtgttgatgccgatgcgcgtgtga
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