Methylorubrum extorquens CM4: Mchl_0207
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Entry
Mchl_0207 CDS
T00809
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mchl_0207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mch03021
]
Mchl_0207
Transcription machinery [BR:
mch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mchl_0207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
HTH_23
Phage_terminase
MerR
HTH_28
NirdL-like_HTH
HTH_11
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ACK81150
LinkDB
All DBs
Position
complement(206069..206587)
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AA seq
172 aa
AA seq
DB search
MATSVVVEDRAALDGMFRKHNGWLMRWLGRQRWTVSSAEDLASDVFIALLTMPNLGAVRE
PRALMTTVARRLICDARRRDDVRRSYEAELAALPESLDISAEERLIVVQALQAIDAMLST
LSDKARRAFLLSQVEGAPYADIAAELGVSVSMVRKYVAQGLRATYLATANQG
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccgtggttgttgaggatcgcgcggcgctcgatgggatgttccgcaagcac
aacggctggctgatgcgctggctgggccggcagcgctggacggtgtcctcggcggaagat
ctcgcctccgacgttttcattgccctgctgacgatgccgaatctcggcgccgtccgcgag
ccgcgcgcactgatgacgacggtcgcccgccggctgatctgcgatgcgaggcgccgagac
gacgtgcggcgcagctatgaggccgagttggcggccttgcccgaatccctggatatctcg
gccgaagagcggctcatcgtcgtacaagctctgcaggcgatcgacgcgatgctgtccacc
ctgtccgacaaggcacgcagggcgttcctgctcagccaggtcgagggtgccccctacgca
gacattgccgcggaattgggcgtctccgtcagcatggtgcgcaagtacgttgcacagggg
ttgcgcgccacgtatctggcaaccgccaaccagggctga
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