Methylorubrum extorquens CM4: Mchl_0348
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Entry
Mchl_0348 CDS
T00809
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mch
Methylorubrum extorquens CM4
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_0348
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mchl_0348
Archaeal homologous recombinant proteins
Mchl_0348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ACK81285
UniProt:
B7KZ12
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All DBs
Position
328993..330240
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AA seq
415 aa
AA seq
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MIRVLHTGDWHIGQTLRGFSREREHDAVFGCLESIVVEREVDALVVAGDVFDSQNPSGES
QARFYTLMARLHVARPAMTIVITAGNHDAAGRLEAPRPLLEAIGVHVVGNVRRRDGAIDL
DRHLVPVRSANGEVAAQVLAVSYPTAACLPPLSSLGQPPRIGETSPIVRAVRDLYGQLFE
AARPRLAGLPLLVTGHLHVAGGLESEGAERRILVGGEHAVPSDVFPEEARYVALGHLHRA
QVLGRGQVRYCGSLIPLSAAEQPYRHGVTLVTLGAGAAEIEHIEIPRPVPFLRLPASGDM
PLADLGDHLNALALDPDLPMEARPYIQVRLAREGLLPGYRAEVDRIAESFPVRVVDVRVT
VPQRTAIAIEESEAPPPRLSERDPEELFRLAFRAKWDEDPEPAHLDVFHRARAEA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcgttctccatacgggcgactggcatatcggtcagacgctgcgcggcttctcg
cgcgaacgcgagcacgacgcggtgttcggctgtctcgagagcatcgtcgtggagcgcgag
gtcgatgccctcgtcgtcgccggcgacgtgttcgacagccagaacccgtccggcgagtcg
caggcccgcttctacaccttgatggcgcgcctccacgtggcgcggccggccatgaccatc
gtcatcaccgccggcaatcacgatgccgccgggcggctggaagcaccgcgcccgctgctc
gaagccatcggcgtccacgtcgtcggcaatgtccgccgccgcgacggcgcgatcgacctc
gaccggcacctcgtgccggttcgctcggccaacggggaggtggctgcgcaggtgctcgcc
gtctcctatcccaccgccgcctgcctgccgccgctctcgtcgctcggccagccgccccgc
atcggtgagacgtcgccgatcgtgcgggcggtgcgcgacctctacggccaactcttcgag
gcggcccggccgcggctcgctggcctgccgctcctcgtcaccggccatctccatgtggca
ggcggactcgaatcggagggggcggagcggcgcatcctcgtcggcggcgagcatgccgta
ccgtccgacgtgtttccggaggaggcgcgctacgtggcgctcggccatcttcaccgggcg
caagtgctcggccggggacaggtgcgctattgcggctcgctgatcccgctctcggcggcc
gagcagccctaccgccacggggtcaccctggtgacgcttggcgcgggcgccgcggaaatc
gagcatatcgagatcccccgccccgtaccgttcctgcgcctgccagcctcgggcgacatg
ccgctggccgatctcggcgatcatctcaacgcgctggcactcgaccccgatctgccgatg
gaggcgcggccctatatccaggtgcggctcgcccgcgagggattgctgcccggctaccgc
gccgaggtggaccgcatcgccgagagctttccggtgcgcgtggtcgatgtgcgggtgacg
gtgccgcaacggaccgcgatcgcgatcgaggaatccgaagcgccgccgccgcgcctgtcc
gagcgcgacccggaagaactgttccgcctcgccttccgcgccaagtgggacgaggacccc
gagcccgcccatctcgacgtgttccaccgcgcacgagcggaagcctga
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