Methylorubrum extorquens CM4: Mchl_0370
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Entry
Mchl_0370 CDS
T00809
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03030
DNA replication
mch03430
Mismatch repair
mch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mchl_0370
03430 Mismatch repair
Mchl_0370
03440 Homologous recombination
Mchl_0370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mch03032
]
Mchl_0370
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_0370
Enzymes [BR:
mch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mchl_0370
DNA replication proteins [BR:
mch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mchl_0370
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mchl_0370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACK81307
UniProt:
B7KZ34
LinkDB
All DBs
Position
complement(356475..357368)
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AA seq
297 aa
AA seq
DB search
MKVVAIDFETANERRDSACAVGLAWIEGGRVARRESRLIRPPQLRFSPGNIRVHGILPAD
VRDAPTFPEVIAEFLPDLSGGLMLAHNAGFDMGVLAASLAAWGEPVPDMAGHCTLQIARR
VFPDPAGHGLAKVAGRLGIRFEHHDAGEDAFACAEIALAALRETGAADIADLARGLGLTP
IRALTTPRRDMTRSTSAKALRASGIVDLRPTNALRFAMRGSTGNRYQLEFEERTDGPYLR
CSCPAGTHRRRCRHVDALVEGDITELTSNNFDDVERLRQLLDGKSVGPLRIKGVAAA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcgcgatcgatttcgagaccgccaacgagcggcgcgacagcgcctgcgcg
gtcgggcttgcctggatcgaggggggccgcgtagcgcggcgcgaatcccggctgatccgc
ccgccgcagttgcggttctcgcccggcaatatccgcgtccacggcatcctgccggcggac
gtgcgtgatgcgccgacctttcccgaagtcatcgccgagttcttgcccgacctgtcgggc
gggttgatgctcgcgcataatgccggcttcgacatgggcgtgctcgccgcctcgctcgct
gcctggggcgagcccgtgccggacatggccggccattgcaccctccagatcgcccggcgc
gtcttccccgatcccgccggccacggcctcgccaaggtggcgggccgcctcggtatccgg
ttcgagcaccacgatgcgggcgaggatgcctttgcctgcgccgagatcgcgctcgcggcc
ctgcgcgagacgggtgcggccgacatcgccgacctcgctcgcggcctcggcctcactccg
atccgtgctctcaccacgccgcgccgggacatgacccgctcgacctcggcgaaggcgctg
cgcgcctcgggcatcgtcgatctccggcccaccaatgcgctacgcttcgccatgcgcggc
agcaccggcaaccgctaccagctcgaattcgaggagcggacggacgggccgtatctgcgc
tgctcctgcccggcgggcacccaccgccgccgctgccgccatgtcgatgcgctggtcgag
ggcgatatcaccgagctgacatcgaacaatttcgacgatgtcgaacggctgcgccaattg
ctcgatggcaagagcgtcggaccgctgcggatcaagggcgtcgccgctgcctga
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