Methylorubrum extorquens CM4: Mchl_0956
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Entry
Mchl_0956 CDS
T00809
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch00330
Arginine and proline metabolism
mch00480
Glutathione metabolism
mch01100
Metabolic pathways
mch01110
Biosynthesis of secondary metabolites
mch04148
Efferocytosis
Module
mch_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Mchl_0956
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Mchl_0956
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Mchl_0956
Enzymes [BR:
mch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Mchl_0956
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DUF7588
Ribosomal_L27e
Motif
Other DBs
NCBI-ProteinID:
ACK81873
UniProt:
B7L283
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Position
complement(969586..971931)
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AA seq
781 aa
AA seq
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MDFHRRFTVLMCTPAFDPDDLEGARVDQIVAAVEKRGFEVVRARRVEDASIAVQTDSAVG
CLVVDWGKRGLEGKAAALIDMMRKRGLEMPIVIMVRRKRLEDIPVELLDFIDGYIFLAEE
TPEFIARGLVSRVTQYADTLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAIFRDDLDNSVLDLGDLLTHEGPALKAQKEAAKIFGAEKTYFVLNGTSASNKVVL
GSLVAEDDLVLFDRNNHKAAHHGALLLAGGIPIFLETDRNAYGLIGPIYHEALDEGRIRE
KIRDNPLVKDKEAWRKERPFRCAVIEQCTYDGTIYDAQAIVERIGHLCDYILFDEAWAGF
MKFHPLYQRRFAMGLTGLDETSPGIIATQSTHKQLASFSQASQIHTRDGHIRGQTRRVEH
KRLNESFLVHASTSPFYPIFASLDVGAQMMKGRSGVVLWDDTIRLGIEWRKKARAIRKEF
EEREADPKRRWFFDPFVPDVVKGPEGTEIPWESVPTDALAADARYWELTPGAAWHGFTHV
APGFAITDPNKLTVLTPGFDRKTGAYAEHGVPAPIVAQYLRENRIVPEKNDLNSLLFLLT
PGVESSKAGTLISGLVAFKRLHDDNVPLEEAMPEFVARRPKRYRGVRLRDLCADYHAFHR
ESGTSALQRKQFMPEHLPEMVMAPKAAAQMLTRNRVDYVPIAEAEGRVATTLMLVYPPGI
GTVLPGERLDERAKPMLDYFKMFEAAANLFPGFEAEIQGVYRESDPDGRIRFHTYVLREG
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggattttcaccgccgcttcaccgtgctgatgtgcacgcccgccttcgatccggatgat
ctggagggcgcgcgcgtcgatcagatcgtcgcggcggtggagaagcgcggcttcgaggtg
gtgcgggcgcggcgcgtcgaggatgcctcgatcgcggtgcagaccgactccgccgtcggc
tgcctcgtggtcgattggggcaagcgcggactcgaaggcaaggcggccgcgctcatcgac
atgatgcgcaagcgcggcctggagatgccgatcgtcatcatggtccgccgcaagcggctg
gaggacatcccggtcgagctgctcgactttatcgacggctacatcttcctggcggaagaa
acgccggaattcatcgcccgcggcctcgtttcccgcgtgacgcagtatgccgacacgctg
aagacgccgttcttcggcgcgctcgtcgattacgccgaagagggcaaccagctctggacc
tgccccggccataacggcggcatcttctacaaccgctcgccgatcggccgcatcttcgtc
gagcatctcggcgaggcgatctttcgcgacgacctcgacaactcggtgctcgatctcggc
gacctgctgacccacgaggggcccgcgctcaaggcgcagaaggaagcggcaaagatcttc
ggggcggaaaagacctatttcgtcctcaacggcacctcggcctcgaacaaggtggtgctg
ggctcgctggtggccgaggacgatctcgtcctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgttgctggccggcggcatcccgattttcctcgagaccgaccgcaac
gcctacggcctgatcgggccgatctaccacgaggcgctcgacgaggggcgcatccgcgag
aagatccgcgacaacccgctcgtgaaggacaaggaggcgtggcgcaaggagcgcccgttc
cgctgcgccgtgatcgagcaatgcacctatgacggcacgatctacgacgcacaggcgatc
gtcgagcgcatcggccacctgtgcgactacatcctgttcgacgaagcctgggcgggcttc
atgaagttccacccgctctaccagcgccgcttcgccatgggcctgaccgggctcgacgag
acttcgcccggcatcatcgctacgcaatcgacccacaagcagctcgccagcttctcccag
gcctcgcagatccacacccgcgacgggcatatccgcggacagacccggcgggtcgaacac
aagcgcctgaacgagagcttcctcgtccacgcctcgacctcgccgttctacccgatcttc
gcctcgctcgacgtcggggcgcagatgatgaagggccgctccggcgtcgtgctgtgggac
gacacgatccgtctcggcatcgagtggcgcaagaaggcccgcgccatccgcaaggagttc
gaggagcgcgaggccgacccgaagcggcgctggttcttcgaccccttcgtgcccgacgtg
gtgaaggggcccgagggcacggaaatcccgtgggaatccgtgccgaccgacgccctagcc
gccgatgcccggtactgggagctgacgccgggcgcggcgtggcacggcttcacccatgtc
gcgccgggctttgccatcaccgaccccaacaagctcaccgtgctcacccccggcttcgac
cggaagacgggggcctatgccgagcacggcgtgccggcgccgatcgtcgcgcagtacctg
cgcgagaaccggatcgtcccggagaagaacgacctcaactcgctgctcttcctgctgacg
ccgggcgtcgagtcgtcgaaggccggcacgctcatctccggcctcgtcgccttcaagcgg
ctgcacgacgacaacgtgccgctcgaagaggcgatgccggaattcgtggcacgccggccc
aagcgctaccgcggcgtgcgcctgcgcgacctctgcgccgattaccacgccttccatcgc
gagtcgggcacctcggcgctccagcgcaagcagttcatgcccgagcacctgccggagatg
gtgatggcgcccaaggccgccgcgcagatgctgacccgcaaccgggttgattacgtgccg
atcgcggaggccgaggggcgcgtcgccacgaccctgatgctggtctatccgcccggcatc
ggcaccgtgctgcccggcgagcgcctcgacgagcgggccaagcccatgctcgactatttc
aagatgttcgaggcggccgccaacctgttccccggcttcgaggccgagatccagggcgtc
taccgcgagagcgacccggacgggcgcatccgcttccacacctacgtcctgcgcgagggc
gcctga
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