Methylorubrum extorquens CM4: Mchl_1177
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Entry
Mchl_1177 CDS
T00809
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03030
DNA replication
mch03430
Mismatch repair
mch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mchl_1177
03430 Mismatch repair
Mchl_1177
03440 Homologous recombination
Mchl_1177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mch03032
]
Mchl_1177
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_1177
Enzymes [BR:
mch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mchl_1177
DNA replication proteins [BR:
mch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mchl_1177
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mchl_1177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF1707
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ACK82065
UniProt:
B7KPI2
LinkDB
All DBs
Position
1188956..1192477
Genome browser
AA seq
1173 aa
AA seq
DB search
MARTLKEVGFVHLHVHSSYSLLEGGVKAGDLVKAAAADRQPALALTDTNNLFGALEFSEY
AAKAGIQPIAGLQLTICFEAPDPMARLPQAGCANIVLLAQDETGYGNLLRLGSRAHFDGP
LGAAPNLAVSVLEGNVEGLIGLTGGLSGPLDTSLRAGRVDQAARRLEILKGAFGEEHLYV
EIQRHGLDDERAVERELLRLADTNGLGIVATNEPFFAKPGDYDAHDALLAIAEGRLVSDE
RRRRLTPRHAFTTRAAMMELFRDLPDALSASVEIAMRCSYRARTRKPILPNFASVAAGEA
PPMADALAEAAETPVQAVAADEPTELCRQAEAGLELRLKQHGTAPGFTEEDYRARLKFEL
DVIVKMKFPGYFLIVSDFIKWAKDHDIPVGPGRGSGAGSLVAWSLLITDLDPLRFGLLFE
RFLNPERVSMPDFDIDFCVEGRERVIRYVQQRYGERQVGQIITFGTLLARGVLRDVGRVL
EMPYGQVDKLTKLVPQNPANPVTLAQAIEGEPKLQQAIEEEPIVARLIEISKKLEGLHRH
ASTHAAGVVIGDRPLEELVPLYRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTMLRC
CTDLLKQRGIEVDLAQIPLDDKKTYEPMGRGETVAVFQVESAGMRKALCEMQADRLEDII
ALVALYRPGPMANIPVYCERKLGRDAGNEASWYSHPMLEPILKETFGIIVYQEQVMEVAK
VLAGYTLGEADMLRRAMGKKIKAEMDAQRDRFVKGCTENGLTKAKADEIFDLLAKFADYG
FNKSHAAAYALVTYQTAYLKANHPVEFLAAAMTLDIDNTDKLAEFRQDAQRLKITVEPPS
VNTSGVVFDVREGRILYALAAIKGVGRSAVESIVAARGDKPFKDLACFARRLNPRHVNKR
TLENLIAAGALDCIEPDRARAWAAVEPMMKMAQGAAEAETSGITDMFGGVASVDVALRIP
PHEFWTHTDKLKRECDAIGFFLSGHPLDEYGPILEKLRVQSWADFCRAVRAGTASVGRIA
ASVLDRSERRTKSGNKLGIVILSDQTGHFEAIIFSEGLNQYRDILEPGRPLVLTIQANLE
GEDVRARITTAEPLDQAAARHQKGMRIFLRDDRALSSVQQRLTLRGEGEVSLILILDGGE
REVEVRLKDRYQATPQVAGALRAVPGVVQVEVN
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcacactcaaagaggtcggcttcgtccacctccatgtccactcgtcctactcg
ctgctcgaaggcggcgtgaaggcgggtgatctcgtcaaggcggccgcggccgaccggcag
cccgcgctcgcgctcaccgacaccaacaacctgttcggggcgctggaattctccgaatac
gccgccaaggcggggatccagccgatcgcgggcctgcagctcacgatctgcttcgaggcg
ccggacccgatggcgcgcctgccccaggccggctgcgccaacatcgtgctgctcgcccag
gacgagaccggctacggcaacctgctgcgtctgggcagccgggcgcatttcgatggtccg
ctcggcgccgcgcccaacctcgccgtctcggtgctggagggcaacgtcgaggggctgatc
ggtctcaccggcgggctctcggggccgctcgacaccagcctgcgtgccggccgcgtcgat
caggccgcgcgccgcctggagatcctgaaaggggcgttcggcgaggagcacctctacgtc
gagatccagcgccacggcctcgacgacgagcgcgcggtcgagcgcgaattgctgcggctc
gcggacacgaacggtctcggcatcgtcgccaccaacgagccgttcttcgccaagcccggc
gattacgacgcgcacgacgcgctgctcgccatcgccgaaggccgcctcgtctccgacgag
cgccgccgccggctcaccccgcgccacgccttcaccacgcgcgccgcgatgatggagctg
ttccgcgatctgccggacgcgctctcggcctccgtcgagatcgccatgcgctgctcttac
cgggcgcgaacccgcaaaccgatcctgccgaacttcgccagcgtcgccgcgggcgaggcg
ccgcccatggccgacgcactggccgaagccgccgagacgccggttcaggcggtggccgcc
gacgagccgaccgagctgtgccgacaggccgaggccgggctggagctgcgcttgaagcag
cacggcaccgcgccgggcttcacggaggaggattaccgcgcgcggctgaagttcgagctc
gacgtcatcgtcaagatgaagttcccgggctacttcctgatcgtctcggacttcatcaag
tgggccaaggaccacgacattcccgtggggccgggccgcggctcgggcgcgggctcgctg
gtggcgtggtcgctcctcatcaccgacctcgacccgctgcgcttcggcctgctgttcgag
cgcttcctcaaccccgaacgcgtctcgatgccggacttcgacatcgacttctgcgtcgag
ggccgcgagcgggtgatccgctacgtgcagcagcgctacggcgagcggcaggtcgggcag
atcatcaccttcggtacgttgctcgcccgcggcgtgctgcgcgacgtcggccgcgtgctg
gaaatgccctacgggcaggtcgacaagctaacgaagctcgtaccgcagaacccggccaac
cccgtgacgctggcgcaagccatcgagggcgagcccaagctccagcaggcgatcgaggag
gagccgatcgtcgcccgcctcatcgagatctcgaagaagctggagggcctgcaccgccac
gcctcgacccacgccgccggcgtggtgatcggcgaccggccgctcgaagaactggtgccg
ctctatcgagacccgaagacgggcatgcgggtgacccagttcaacatgaaatgggtcgag
caagccggcctcgtgaagttcgacttcctcggcctcaagacgctcaccatgctgcggtgc
tgcacggatctgctcaagcagcgcggcatcgaggtcgatctcgcccagatcccgctcgac
gacaagaagacctacgagccgatgggccgcggcgagaccgtcgcggtgttccaggtggaa
tccgccggcatgcgcaaggcgctctgcgagatgcaggccgaccgcctggaggacatcatc
gcgctggtggcgctctaccggccgggcccgatggccaacatcccggtctattgcgagcgt
aagctcgggcgtgacgccggcaacgaggcgagctggtactcgcacccgatgctggagccg
atcctgaaggagaccttcgggatcatcgtctaccaagagcaggtgatggaggtcgccaag
gttctcgccggctacacgctgggcgaggccgacatgctccgccgtgccatgggtaagaag
atcaaggcggagatggacgcccagcgcgaccgcttcgtgaagggctgcaccgagaacggc
ctgaccaaggctaaggccgacgagatcttcgacctgctcgccaagttcgcggattacggc
ttcaacaagtcccacgcggccgcctacgcgctggtgacctaccagaccgcctatctgaag
gcgaaccatccggtcgagttcctggccgcggccatgaccctcgatatcgacaacaccgac
aagctcgccgaattccgccaggacgcgcagcgcctgaagatcacggtcgagcccccgtcg
gtgaacacctcgggcgtggtgttcgacgtgcgggagggacgcatcctctacgcgctcgcc
gcgatcaagggcgtcggccgctcggcggtggagtcgatcgtggccgcgcgcggcgacaag
ccgttcaaggacctcgcctgcttcgcccggcgcctgaacccgcgccacgtcaacaagcgc
acgctggaaaacctgatcgcggccggcgcgctggactgcatcgagcccgatcgcgcacgg
gcctgggccgcggtcgagccgatgatgaagatggcccagggcgcggccgaggccgagacc
tcgggcatcaccgatatgttcggcggcgtcgcctcggtggatgtggctttacgcatcccg
ccgcacgagttctggacccacaccgacaagctcaagcgcgaatgcgacgccattggcttc
ttcctctcgggccatccgctcgacgagtacgggccgatcctcgaaaagctgcgggtccag
tcctgggccgatttctgccgggcggtgcgggcgggcacggccagcgtcgggcggatcgcg
gcctcggtgctcgaccgctcggagcgccgcaccaagagcggcaacaagctcggcatcgtc
atcctctcggaccagaccgggcatttcgaggcgatcatcttctccgaggggctgaaccag
taccgcgacatcctcgaacccggccgcccgctggtgctgacgatccaggccaacctggag
ggcgaggacgtgcgcgcccgcatcaccaccgccgagcccctcgatcaggccgccgcccgc
caccagaagggcatgcgcatcttcctgcgcgacgaccgcgccttgagttcggtgcagcag
cgcctgaccctgcgcggcgagggcgaggtttcgctgatcctgatcctcgatggcggcgag
cgcgaagtcgaggtgcggctgaaggatcgctaccaggcgaccccgcaggttgcgggtgcg
ctgcgtgccgtgccgggggtggtgcaggtggaggtgaactga
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