Methylorubrum extorquens CM4: Mchl_2232
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Entry
Mchl_2232 CDS
T00809
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mchl_2232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_2232
Enzymes [BR:
mch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Mchl_2232
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Mchl_2232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACK83079
UniProt:
B7KXK5
LinkDB
All DBs
Position
complement(2348349..2349143)
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AA seq
264 aa
AA seq
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MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK
AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP
GPKYSYKLAFMARLRAHARALMTTEEALVLAGDFNVIPEPEDAADPSVWTQDALFLPEPR
RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS
VQRHLRGLEKPSDHVPVTVELSDG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccacctggaacgtcaattcgatcaagcagcgggtcggccacctgctgggc
ttcctcgacgaggccaagcccgacgtggtctgcctgcaggagctgaaatgccaggacgcg
tccttcccccgcgaggaaatcgaggcggcgggctacgcggtcgagacgctggggcagaag
gcctataacggcgtcgccctgctggtgcgcgcaccgctccagtacacccagctgctgcgc
ggcctgcccggcgacgccgaggacgagcaggcccgctacatcgaggcgctggtgcacggc
gaaggcgtggcgccggtgcgggtcgcctcgatctacctgccgaacggcaacccggccccg
ggcccgaaatacagctacaagctcgccttcatggcccgcctgcgggcccatgcccgcgcg
ctgatgacgaccgaggaggcgctggtgctggccggcgacttcaacgtcatccccgagccc
gaggacgccgccgacccctccgtctggacgcaggacgccctgttcctgcccgagccccgc
cgcgccttccgcgcgctgctggcggaaggttttacggatggcctgcgggcctgcgagccg
agcgccggtctctacactttctgggactatcaggccggctgctggccgcggaaccaaggc
atccgcatcgaccacctgctgctctcaccccaggccgccgaccgcctcgtctcggcctcg
gtgcagcgccacctgcgcgggctggagaagccctcggaccacgtgccggtgacggtggag
ctgagcgacgggtaa
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