Methylorubrum extorquens CM4: Mchl_2251
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Entry
Mchl_2251 CDS
T00809
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mch
Methylorubrum extorquens CM4
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mch03032
]
Mchl_2251
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_2251
Enzymes [BR:
mch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mchl_2251
DNA replication proteins [BR:
mch03032
]
Prokaryotic type
DNA Topoisomerases
Mchl_2251
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mchl_2251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACK83098
UniProt:
B7KY89
LinkDB
All DBs
Position
2366012..2367214
Genome browser
AA seq
400 aa
AA seq
DB search
MLSEEVGAGVVDPREAARDAGLRYVDDSKPGLRRKRNGKGFRYIDPKGAPVRDAEEIARL
KSLAIPPAYTEVWICPHPNGHIQATGRDEKGRKQYRYHPRFREAREASKFHRIMAFAEAL
PGIRARIDADMGKRGLPREKVLATVVHLLETTLIRVGNDDYARSNKSYGLTTLRDPHVKV
AGSEMRFRFKGKSGKEWSVSVRDRRVAKIVKACQDLPGQELFQYLDEDGQRRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFEAFDNAAKAKKNLRAAIESVSSRLGNTP
TICRKCYIHPQILDCYLEGGMLLQVKEAVEGELKNELDVLRPEEAAVLSLLRARLERATK
AASKGTTSESTTKIEPPRQTGGRKARATGTKRTSGGRRAA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggaggaggtcggagccggcgtggtcgatccccgcgaggccgcgcgggatgcg
ggcctgcgctacgtggacgattccaagcccggcctgcggcgcaagcgcaacggcaagggc
ttccgctacatcgacccgaagggcgccccggtccgcgacgcggaggagatcgcccggctc
aaaagccttgcgatcccgccggcctacaccgaggtgtggatctgcccgcacccgaacggc
catatccaggcgaccgggcgcgacgagaaggggcgcaagcagtaccgctaccatccccgc
ttccgcgaggcgcgggaggcctcgaagttccaccgcatcatggccttcgccgaggcgctt
ccgggcatccgcgcgcggatcgacgccgacatgggcaagcgcggcctgccccgcgaaaag
gtgctcgccaccgtggtccacctcctggagaccacgctgatccgtgtcggcaacgacgat
tacgcccgctccaacaagagctacggcctcaccaccctgcgcgatccgcatgtgaaggtg
gccggctccgagatgcgcttccgcttcaagggcaagagcggcaaggaatggtcggtctcg
gtgcgcgaccgccgcgtggccaagatcgtcaaggcctgccaggacctgcccggccaggag
ctgttccagtatctcgacgaggatggccagcggcgcgacgtcacctcctcggacgtgaac
gcgtatctccgtgagatcacgggcgaggatttcaccgccaaggatttccgcacctgggcc
ggcacggtgctggcggccctggcgctgcgggagttcgaggcgttcgacaacgcggccaag
gccaagaagaatctgcgcgcggcgatcgagtcggtgtcgtctcggctcggcaacacgccg
accatctgccgcaagtgctacatccacccgcagatcctcgactgctacctcgaaggcggg
atgctgctgcaggtgaaggaggcggtcgagggcgaactcaagaacgaactcgatgtgctg
cgcccggaagaggcggcggtgctgagtctgcttcgggcccgtctggaacgggcgacgaag
gccgcgtccaagggtacgacgagcgagagcacgacgaagatcgagccgccgcgtcagacc
ggaggccgcaaggcgagggcgaccggcacgaagcgcacgtccgggggcagacgggcggcg
tga
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