Methylorubrum extorquens CM4: Mchl_2454
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Entry
Mchl_2454 CDS
T00809
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mchl_2454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mch03021
]
Mchl_2454
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_2454
Enzymes [BR:
mch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mchl_2454
Transcription machinery [BR:
mch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mchl_2454
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mchl_2454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ACK83296
UniProt:
B7L0S5
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All DBs
Position
complement(2589523..2590542)
Genome browser
AA seq
339 aa
AA seq
DB search
MVIQKNWQELIKPNKLQVTAGDDPKRVATVVAEPLERGFGTTLGNSLRRVLLSSLQGAAV
TSVQIDGVLHEFSSIPGVREDVTDIVLNIKTIAIRSQTDQPKRMTLRKTGPGLVTAGDIG
AVGDIQILNPDLVICTLDDGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDALYSPV
TKVSYRVETTREGQDLDKDKLTITLETNGAVSPEDALAYAARIIQDQLQVFVNFEEPRKE
EAAPLAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEGEMLRTPNFGRK
SLNEIKEVLAGMGLHLGMDVPGWPPENIEDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtcattcagaagaactggcaagagctcatcaagccgaacaagctgcaggtgacggcc
ggcgacgatcccaagcgggtcgccaccgtcgtggccgagccgctcgagcgcggcttcggc
acgacgctcggcaacagcctgcgccgcgtgctgctctcctcgcttcagggcgctgccgtc
acctccgtccagatcgacggcgtgctgcacgagttctcgtcgatccccggcgtgcgtgag
gacgtgaccgacatcgtcctcaacatcaagaccatcgccatccgctcgcagaccgaccag
cccaagcgcatgaccctgcgcaagacgggcccgggcctcgtcaccgcgggcgacatcggc
gccgtcggcgacatccagatcctgaaccccgacctcgtgatctgcaccctggacgacggg
gccgagatccgcatggagttcacggtcgccacgggcaagggctatgtcccggccgagcgc
aaccgccccgaagatgcgccgatcggcctgatcccggtcgatgcgctctactcgccggtg
actaaggtcagctaccgcgtcgagaccacccgcgagggccaggatctcgacaaggacaag
ctgacgataacgctcgagaccaacggcgccgtgtcgccggaggatgcgctggcctacgcc
gctcgcatcatccaagaccagctccaggtcttcgtgaacttcgaggagccccgcaaggaa
gaggccgcgccgctcgcgccgcagctccccttcaacccggcgctgctcaagaaggtggac
gagctcgaactgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctcatccagaagtcggagggcgagatgctgcgcaccccgaacttcggccgcaag
tcgctcaacgagatcaaggaagtgctcgccggcatgggcctgcacctcggcatggacgtt
cccggctggccgccggagaacatcgaggatctcgccaagcgcttcgaagagcactactga
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