Methylorubrum extorquens CM4: Mchl_2724
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Entry
Mchl_2724 CDS
T00809
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch02020
Two-component system
mch02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mchl_2724
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mchl_2724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mch03021
]
Mchl_2724
Transcription machinery [BR:
mch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mchl_2724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACK83563
UniProt:
B7KNX4
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All DBs
Position
2863372..2864907
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AA seq
511 aa
AA seq
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MSLLQRLEMRQGQALVMTPQLLQAIKLLQLSQLDLSAYVDAELERNPLLERAESEGESER
EAPEASGDGEYDGGDGPEAETWLGSEMTQSRSEIEGDLDTRLDNVFADENPTPRETGTGD
MLSLTPAPYGNAGGSFDGELPDFEATLTAETSLREHLAGQLNLATQNPSDRLIGSFLIDA
VDDAGYLREDIDGVAERLGASLDDVARILKLVQTFDPPGVAARDLAECLAIQLREQDRFD
PAMQALVSRLDLVAKRDFPALRRLCGVDDEDLVEMLAEIRRLDPKPGRAFGAHAVEVLVP
DVFVRPAPDGSWLVELNSEALPRVLVNQSYYARVSKGAVADGDKAFLSECLQTANWLTRS
LEQRARTILKVATEIVRQQDAFFLHGVAHLRPLNLKTVAEAIGMHESTVSRVTSNKSIGT
SRGTLEMKYFFTAAIPGAAGAASHSSESVRHRIKQLVDAEASDVLSDDALVQRLRDEGID
IARRTVAKYRESLRIPSSIERRREKMATAVR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctccagcggctcgagatgcgccagggtcaagccctggtgatgacaccgcaa
ctgctgcaggcgatcaagctcctgcagctctcgcagctcgatctctcggcctatgtcgat
gccgaactggagcgcaatccgcttctggagcgcgccgagtccgaaggggaatccgagcgc
gaggcgccggaggcctcgggcgatggcgagtacgacggcggcgacgggccggaagccgag
acatggctcggctccgagatgacgcagagccgcagcgagatcgagggcgacctcgacacg
cgcctcgacaacgtgttcgccgacgagaaccctaccccgcgcgagaccgggaccggggac
atgctctcgctgaccccagccccttacggcaatgccggcggcagcttcgacggcgagctt
cccgatttcgaagcgacgctgaccgccgagaccagcttgcgcgagcatctcgccggacag
ctcaatctcgcgacgcaaaacccctcagaccggttgatcggcagcttcctgatcgatgcg
gtcgacgatgcgggttacctgcgcgaggacatcgacggcgtggccgagcggctcggcgcc
tccctcgatgacgtcgcccgcattctgaaactcgtccagaccttcgatccgccgggcgtg
gccgcccgcgacctcgccgaatgcctcgcgatccagcttcgcgagcaggatcggttcgat
ccggcgatgcaggcgctggtctcgcgcctcgatctcgtggccaagcgcgacttcccagcc
ctgcgccgcctctgcggcgtggacgacgaggatctcgtcgagatgctggccgagatccgg
cgcctcgacccgaagcccggccgcgccttcggcgcccacgcagtcgaggttttggtcccc
gacgtgttcgtccgccccgcgcccgacggctcctggctggtggaactgaactccgaggcg
ctgccgcgggtgctggtcaaccagagctactatgcccgcgtctcgaagggcgcagtggcg
gacggcgacaaggcgttcctgtccgagtgcctgcagacggcgaactggctcacccgcagc
ctggagcagcgggcgcgcaccatcctgaaggtcgcgaccgagatcgtccgccagcaggac
gccttcttcctgcacggtgtcgcccatctgcgtccgctcaacctcaagacggtcgccgag
gcgatcggcatgcacgaatcgaccgtctcccgcgtcacctccaataagtcgatcggcacc
agccgcggcaccctggagatgaagtacttcttcaccgccgcaatccccggcgccgccggt
gccgcgtcccattcctcggaatcggtgcgccaccgcatcaaacaacttgtcgatgcggag
gcctccgacgtcctgtccgacgacgcgctggtccagcgcctgcgcgacgagggcatcgac
atcgcccgccgcaccgtcgccaagtatcgggagtcgctgcggatcccctcgtcgatcgag
cgccgccgggagaagatggccacggccgtccgctga
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