Entry |
|
Name |
(GenBank) helicase domain protein
|
KO |
K19789 | DNA repair protein RadD |
|
Organism |
mch Methylorubrum extorquens CM4
|
Brite |
KEGG Orthology (KO) [BR:mch00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:mch03400]
Mchl_3048
DNA repair and recombination proteins [BR:mch03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Mchl_3048
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3219798..3221435
|
AA seq |
545 aa
MLRLREYQRAALDALDCHWDQGGGPGLVVLPTGAGKALVIAALIREWLDRSPEARICVVT
HVRELVVQNHGELLAYWPEAPAGIFSAGVGRRDVRAQVTFCSIQSVRDRAELFGAIDLIV
IDEAHLVPRSSETGYGRFLAAARAGNPDLKVAGFTATPYRLDSGRLDEGEGRVFERIVYE
SLVGDLIHQGFLAPLICKATALALDVSGVPKRGSDYIPSALEAAVNREWITRAAVEEMVG
YGRERRAWLAFCAGLAHAASVRDAIRAEGISCETVTAETGKRERDRMVRDFRAGKIRCLV
SVGVLSTGFNVPEVDLIALLRPTQSAGLYVQQVGRALRRAPGKSDAIVLDYAGLVRMHGP
VDAVTARSVALGPAALGMARAKPCPGCGALIALNASTCEACWVEPEPEDEEAPHAASAED
AMPILSESICPWREVVGWRLDRGPGGSGPDRLEVALRWRGGGCRVEVCLEHSGHAREKAV
QWWRAFGGADPVPMSVAAALERADELERPETLRVEAAGRLSESVTVRFSDGRRFRDLRRW
GTLAA |
NT seq |
1638 nt +upstreamnt +downstreamnt
atgctgcgccttcgcgagtaccagcgcgccgccctcgacgcgctcgattgtcattgggac
cagggcggcgggcccggcctcgtcgtgctgccgaccggcgccggcaaggcgctcgtcatc
gccgcgctgatccgcgaatggctggatcggtcgccggaggcgcggatctgcgtcgtcacc
catgtccgcgaactcgtggtgcagaaccacggcgagttgctggcgtactggcccgaggcg
cccgccggcatcttttccgccggcgtcggccggcgtgacgttcgcgcgcaggtcaccttc
tgctcgatccaatccgtgcgcgaccgggccgaattgttcggcgccatcgacctcatcgtc
atcgatgaggcccatctggtgccgcggtcgagcgagaccggctacggccgcttcctcgcc
gcggcgcgggccggcaacccggatctcaaggtcgcgggcttcaccgccacgccctaccgg
ctcgattccggccggctcgacgagggcgagggccgagtgttcgaacggatcgtctacgaa
tcgctggtcggcgacctgatccatcagggctttctggcgcccctgatctgcaaggcgacc
gcgctcgccctcgatgtgtcaggggtgccgaagcgcggcagcgactacatcccctcggcg
ctggaggcggcggtcaaccgcgaatggatcacccgcgcggcggtcgaggagatggtgggc
tatggccgcgagcggcgggcgtggctcgccttctgcgccgggctcgcgcacgcggcctcc
gtgcgcgatgcgatccgggcggaagggatctcctgcgagaccgtcacggccgagaccggc
aagcgcgagcgagaccggatggtgcgcgacttccgcgccggaaagatccgctgcctcgtc
tcggtcggcgtgctctccaccggcttcaacgtgccggaagtcgatctcatcgccctgctg
cgcccgacccaatcggccgggctctacgtgcagcaggtcggccgggccctgcgccgggcg
ccgggcaaatcggatgcgatcgtgctcgattatgccggactggtgcggatgcacggcccc
gtggacgcggtgaccgcccgcagcgtcgcgctcgggccggcggcgttgggaatggcgcgg
gccaaaccctgccccggctgcggcgcgctgatcgccctcaacgccagcacctgcgaggcc
tgctgggtggagcccgaaccggaggacgaggaggcaccccacgccgcgagcgcggaggac
gcgatgccgatcctgtccgaatcgatctgcccctggcgcgaggtcgtgggctggcgcctc
gaccgcggccccggcggctccggtccggaccggctcgaggtcgccctgcgctggcggggc
ggcgggtgccgggtcgaggtctgcctcgagcattccggccatgcccgcgagaaggcggtg
caatggtggcgcgcgttcggcggcgccgatccggtgccgatgtcggtcgctgcagcgctg
gaacgggccgacgagttggaacgaccggagaccctgcgggtcgaagcggccggccgcctc
tccgagagcgtgacggtgcgtttttctgacgggcgacggttccgcgacctgcgccgctgg
ggcaccctggccgcctga |