Methylorubrum extorquens CM4: Mchl_3565
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Entry
Mchl_3565 CDS
T00809
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch00071
Fatty acid degradation
mch00280
Valine, leucine and isoleucine degradation
mch00310
Lysine degradation
mch00362
Benzoate degradation
mch00380
Tryptophan metabolism
mch00410
beta-Alanine metabolism
mch00640
Propanoate metabolism
mch00650
Butanoate metabolism
mch00907
Pinene, camphor and geraniol degradation
mch00930
Caprolactam degradation
mch01100
Metabolic pathways
mch01110
Biosynthesis of secondary metabolites
mch01120
Microbial metabolism in diverse environments
mch01200
Carbon metabolism
mch01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Mchl_3565
00650 Butanoate metabolism
Mchl_3565
09103 Lipid metabolism
00071 Fatty acid degradation
Mchl_3565
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Mchl_3565
00310 Lysine degradation
Mchl_3565
00380 Tryptophan metabolism
Mchl_3565
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Mchl_3565
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Mchl_3565
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Mchl_3565
00930 Caprolactam degradation
Mchl_3565
Enzymes [BR:
mch01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Mchl_3565
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Mchl_3565
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Mchl_3565
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
F420_oxidored
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
FAD_binding_3
ApbA
NAD_binding_8
2-Hacid_dh_C
Pyr_redox_2
TrkA_N
GIDA
Pyr_redox
AlaDh_PNT_C
Shikimate_DH
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
ACK84385
UniProt:
B7KVH7
LinkDB
All DBs
Position
complement(3750961..3753162)
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AA seq
733 aa
AA seq
DB search
MTATENFRFETDADGIALATWDMPGRSMNVITMEVMAELERIVDTVVADEAIKGCVIVSG
KNNFSGGADLTMLQGLGVEYERLKASEGEEVAMRHFFEESRRLSLVFRKLETCGKPFAAA
VHGLCLGGAFELALACHHRVLADDDKTRVGLPEIKVGLFPGGGGTQRVSRLMQTGDALQM
LFKGEQIRALMAKNMGLAHAVAPAAEIVERAKAWIREGGSAVAPWDVPKFKAPSGKVYSP
AGMMIWPPANAIYRRETHDNYPAAKAILASVYEGLQLPMDLGLRVESRYFAHILRTKEAQ
AMIRTLFISMGEINKGARRPKDVEATKVGKVGVIGAGFMGAGIAYVTAQAGMQVVLIDRD
QEAADAGKAHCHKLITGQINRGKAKTADRDALLARITATPDYGALSDCDLVIEAVFEDPK
VKAEVIAKVEAALPAHAIFASNTSTLPISGLAQTSKRPEQFVGIHFFSPVEKMLLVEIIR
GNQTGDRAVATALDYVRAIKKTGIVVNDSRGFFANRCVLAYIHEGHKMLTEGVPPAMIEN
VARMAGMPVGPLSLNDEVALDLGLKIMRATEAQLGEGAVDPDQKRLLVAMVETHGRLGRK
NKRGFYDYPEGGQKTLWPGLAEIQPNRLDPESIDIDELKHRFLVVQALEAARTMQEGVVT
DPREADVGSILGFGFAPFTGGALSYIDFMGAKAFVALARELEARHGARFTPPDNLLAMAE
SGARFYDALKQAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaccgagaatttccgcttcgagaccgatgccgacggcatcgcgctcgcgacc
tgggacatgccgggccgttcgatgaacgtcatcaccatggaggtgatggcggaactggag
cggatcgtcgacacggtcgtcgccgacgaggccatcaagggctgcgtcatcgtctcgggg
aagaacaacttctccggcggcgccgacctcaccatgcttcagggcctcggggtcgagtac
gagcggctgaaggcgagtgagggcgaggaggtggccatgcgccacttcttcgaggagtcg
cggcgcctcagcctcgtgttccgcaagctcgagacgtgcggcaagccgttcgcggcggcg
gtgcacggcctgtgccttggcggcgccttcgagctggcgctggcctgccaccaccgggtg
ctcgccgacgacgacaagacccgcgtcggcctgcccgagatcaaggtcggcctgttcccc
ggcggcggcggcacgcagcgcgtgtcccgtctgatgcagaccggcgacgcgctgcagatg
ctgttcaagggcgagcagatccgcgcgctcatggccaagaacatggggctggcccacgcc
gtcgccccggccgcggagatcgtcgagcgggccaaggcctggatccgcgagggcggctcg
gcggtggcaccctgggacgtgccgaagttcaaggcgccgtccggaaaggtctactcgccc
gccggcatgatgatctggccgccggccaacgcgatctatcgccgcgagacccacgacaat
tatccggccgccaaggcgatcctggcctcggtctacgagggcctgcagctgccgatggat
ctcggcctccgggtcgagagccgctacttcgcccatatcctgcgcaccaaggaagcgcag
gcgatgatccgcaccctgttcatctccatgggtgagatcaacaagggcgcccgccgcccg
aaggatgtggaggcgaccaaggtcggcaaggtcggcgtgatcggcgccggcttcatgggc
gcgggtatcgcctacgtcacggcgcaggccgggatgcaggtcgtgctgatcgaccgcgat
caggaggcggccgatgccggcaaggcgcattgccacaagctcatcaccggccagatcaac
cgcggcaaggccaagaccgctgaccgcgacgcgctgctcgcccgcatcaccgccaccccc
gattacggtgccctgtccgattgcgacctcgtgatcgaggcggtgttcgaagaccctaag
gtcaaggccgaggtgatcgccaaggtcgaggcggcgctgccggcgcacgcgatcttcgcc
tccaacacctcgaccctgccgatctccggcctcgcccagacctcgaagcggcccgagcag
ttcgtcggcatccacttcttctcgccggtggagaagatgctgctcgtggagatcatccgc
ggcaaccagaccggagaccgcgcggtcgccaccgccctcgactacgtgcgcgcgatcaag
aagaccggcatcgtcgtcaacgattcccgcggcttcttcgccaaccgctgcgtgctcgcc
tacatccatgagggccacaagatgctcaccgagggcgtgcccccggcgatgatcgagaac
gtggcgcggatggccggcatgccggtcggcccgctctcgctcaacgacgaggtggcgctc
gatctcggcctcaagatcatgcgggcgaccgaggcgcagctcggcgagggcgctgtcgat
ccggaccagaagcggctcctcgtcgcgatggtcgagacgcatggccggctcgggcgtaag
aacaagcgcggcttctacgactaccccgagggcggccagaagacgctctggccggggctc
gccgagatccagccgaaccggctcgacccggagagcatcgacatcgacgagctgaagcac
cgcttcctcgtggtgcaggcgctggaggccgcccgcacgatgcaggagggcgtggtgacc
gatccgcgcgaggcggatgtcggctcgatcctcggcttcggcttcgcccccttcaccggc
ggcgcgctctcctacatcgacttcatgggcgccaaggccttcgtggcgctggcacgtgag
ctcgaagcccggcacggcgcccgcttcaccccgccggacaacctcctggcgatggccgag
tccggggcgcgcttctacgacgcgctgaagcaggcggcgtag
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