Methylorubrum extorquens CM4: Mchl_3946
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Entry
Mchl_3946 CDS
T00809
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch00061
Fatty acid biosynthesis
mch00071
Fatty acid degradation
mch01100
Metabolic pathways
mch01212
Fatty acid metabolism
mch02024
Quorum sensing
mch04146
Peroxisome
Module
mch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Mchl_3946
00071 Fatty acid degradation
Mchl_3946
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Mchl_3946
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mchl_3946
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mch01004
]
Mchl_3946
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mch04147
]
Mchl_3946
Enzymes [BR:
mch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Mchl_3946
Lipid biosynthesis proteins [BR:
mch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Mchl_3946
Exosome [BR:
mch04147
]
Exosomal proteins
Exosomal proteins of breast milk
Mchl_3946
Exosomal proteins of breast cancer cells
Mchl_3946
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACK84757
UniProt:
B7KYK6
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All DBs
Position
4142926..4144662
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AA seq
578 aa
AA seq
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MAQDRSAERPWLAAYPPGIPADIDVDSVGTVVDLFDRSVLRFAERPAITCFGASLRYREV
GAAAQAVAAWLAANGYGKAGKGSETGVDGIGDRIAVMMPNVPACPVSLLGVLVAGCTVVN
VNPLYTPRELAAQINDSGARVLFVLENFCHTVAQALPQMPSLERIVVAGPGDLLGLKGRI
VDLVSRRVKRAVPPYTLPAGRTLRFEAVVRAGRGLKRPSVAIEPGDVAFLQYTGGTTGIA
KAAMLTHRNIMANVEQSRAWFRGPAGEGDGHVAVTALPLYHIFALTACFLFFFRLGGCCL
LIPNPRDLDGFVKTLSRTRFTNFAGVNTLFNALNNHPKISTVDFSNVEYVVGGGMAVQSA
VAARWKAITGQTILEGYGLSETSPVVSVNPLGLADWTGTIGYPLPSTEVTIRAEDGTVLP
FGVPGELCVRGPQVMAGYWNRPEETRAAMTADGFFRTGDVAVMTPDGQIRIVDRMKDMIL
VSGFNVYPNEVEDVLATHPAVVECAVVGAPCGESGEMVVAHVVLRDPSVEPDALRAHARA
SLTGYKVPRRIVIQDSLPKTNVGKVLRRALRDSGPAAG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggaccggagcgcggagcgtccttggctggccgcctatccccccggcattccc
gccgatatcgacgtcgattccgtcggcacggtggtcgatctgttcgaccgcagcgtgctg
cgcttcgccgagcgcccggcgatcacctgcttcggcgcgagcctgcgctaccgcgaggtc
ggcgccgcggcgcaggcggtggcggcgtggctcgccgccaacggctacggcaaggccggc
aagggcagcgagacgggtgtggacggcatcggcgaccgcatcgcggtgatgatgcccaac
gtcccggcctgtcccgtctcgctgctcggcgtgctggtggcgggctgcaccgtcgtcaac
gtcaacccgctctacaccccgcgcgaactcgccgcgcagatcaacgattccggtgcccgt
gtcctcttcgtgctggagaacttctgccacacggtcgcgcaggcgctgccgcagatgccg
agcctggagcggatcgtcgtggcgggccccggcgacctgctcgggctgaagggacggatc
gtcgatctcgtctcgcggcgggtgaagcgggcggtgccgccctacaccctgccggccggg
cggaccctgcggttcgaggcggtggtgcgggcgggccgcggcctcaagcgcccctcggtc
gcgatcgagcccggcgacgtcgccttcctgcaatataccggcggcaccaccggcatcgcc
aaggcggcgatgctgacccaccgcaacatcatggccaatgtcgagcagagccgggcgtgg
ttccgcggtccggcgggggagggggacggacacgtggcggtgacggcgctgccgctctac
cacatcttcgcgctgacggcctgcttcctgttcttcttccggctcggcggttgctgcctg
ctgatcccgaacccgcgcgatctcgacggcttcgtgaagacgctcagccgcacccgcttc
accaacttcgccggggtgaacacgctgttcaacgcgctgaacaaccacccgaagatcagc
acggtcgatttctcgaacgtggagtacgtggtcggcggcggcatggcggtgcagtcggcg
gtcgccgcccgctggaaggcgatcaccggccagaccatcctcgaaggctacggcctgtcg
gagacctcgccggtggtgagcgtcaaccccctcgggctcgccgactggaccgggacgatc
ggctatcccttgccctcaaccgaggtgacgatccgcgccgaggatggcacggtactgccc
ttcggcgtgcccggcgaactctgcgtgcgcggcccccaggtgatggccggctactggaac
cgcccggaggagacgcgggcggcgatgaccgccgacggcttcttccgcaccggcgacgtg
gcggtgatgacgccggacgggcagatccgcatcgtcgaccggatgaaggacatgatcctc
gtctccggcttcaacgtctacccgaacgaggtcgaggacgtgctcgccacccatccggcg
gtggtcgaatgcgccgtggtcggcgcaccctgcggcgagagcggcgagatggtcgtcgcc
cacgtggtcctgcgcgatccgtccgtggagccggacgcgctcagggcgcatgcccgcgcg
agcctcaccggctacaaggtgccccgccggatcgtgatccaggacagcctgccgaagacc
aatgtcggcaaggtgctgcgccgggccctgcgggacagcgggccggcggcgggctga
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