Methylorubrum extorquens CM4: Mchl_4494
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Entry
Mchl_4494 CDS
T00809
Name
(GenBank) Hemolysin-type calcium-binding region
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch00040
Pentose and glucuronate interconversions
mch01100
Metabolic pathways
mch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Mchl_4494
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mchl_4494
Enzymes [BR:
mch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Mchl_4494
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Beta_helix
NosD
DUF6383
Motif
Other DBs
NCBI-ProteinID:
ACK85270
UniProt:
B7KP18
LinkDB
All DBs
Position
4760054..4761547
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AA seq
497 aa
AA seq
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MPAGQTYSTTPIRTTYDGQVIENLDLWVSDGDAIRVDHDNVVIRNVTIHHADGNGIVVED
VSGVTVQNSLIVNSDPPTGNGGETDAETTGIRVVNASGFTASHVTLQDSGTGIYLGQSPN
AKLSYIEGHNFHGPFPGGQLVQFYQSPNGSLSDFAVTNDASHSHVEDNVSIIDSQNVSIA
NGVIDGNNSPSGAGVMFEGNSQGGHVQNVDVIHMSNGGFSSYSDDVSFVDTRSFDNDAGD
QGRGASLSNGLIWNATGHNVTIEDSTYTDPGVANNIVWGTSSAGADVSAAPSATPMTPIH
NVFDGTATDSTPVADPVPTPAPTPAPTPAPTPAPTPAPTPAPSPTAPTATAPAGTGIDRD
GTASSETMTGSRFADDLDGRGGNDTLNGLAGDDRLYGGAGNDRLDGGSGTDHLWGGTGAD
HFVFKAGNGTDWVEDFQLSGTAQDVVEVSKAMFGSFNALLAAAHDVGSDVAITSGADTLW
LADVHKAQLSAGDFLFV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgggccaaacctatagcaccacccccatccgcacgacgtacgacggacaggtt
atcgaaaatctggatctctgggtctccgacggcgacgccatccgcgtcgatcacgacaac
gtcgtcatccgcaacgtcaccattcaccacgccgacggcaacggcatcgtcgtcgaggac
gtcagcggcgtcaccgtccagaacagcctcatcgtcaattccgatccgcccacgggcaac
gggggcgagaccgatgcggagaccaccggcatccgggtcgtcaacgcgtccggcttcacc
gcgtcccacgtgaccctgcaggacagcggcaccggcatctatctcggccagtccccgaac
gcgaagctctcctacatcgagggccacaacttccacgggccgttccccggcggtcagctc
gttcagttctaccaatcgccgaacggcagcctctcggatttcgctgtcaccaacgatgca
agccactcgcatgtcgaggacaacgtctcgatcatcgacagccagaacgtctcgatcgcc
aacggcgtgatcgacggcaacaactcgccgagcggtgccggcgtgatgttcgagggtaat
tcgcagggtggccacgtccagaacgtcgacgtgatccacatgagcaatggcggcttctcg
tcctattcggacgacgtgtccttcgtcgacacccgctccttcgacaacgatgccggcgac
cagggccgcggcgcgtcgctgtcgaacgggctgatctggaacgcgaccggccacaacgtc
acgatcgaggactcgacctacacggacccaggggtcgccaacaacatcgtctggggaacc
tcctcggccggcgcggacgtgtcggcagcgccctcggccacgccgatgacgccgatccac
aacgtgttcgacgggacggcgaccgacagcacgccggttgcggatccggtgccgacgcct
gccccgacgcctgccccgactcctgccccgactcctgcgccgaccccggccccgactccg
gcgccgtccccgacggccccgacggccacggccccggccggcacgggcatcgaccgggat
ggcacggcgtcctccgagacgatgaccggctcgcgcttcgccgacgacctcgacgggcgg
ggcggcaacgacacgctcaacgggctcgccggcgacgaccgcctctacggcggggccggc
aacgaccggctcgacggcggcagcggcaccgaccacctctggggcggcaccggcgcggat
cacttcgtgttcaaggccggcaacggcaccgactgggtcgaggacttccagctcagcggc
accgcgcaggacgtcgtcgaagtgagcaaggcgatgttcggttcgttcaacgccctgctc
gccgcggcccatgatgtcggctccgatgtcgccatcacctcgggcgccgacacgctgtgg
ctcgccgacgttcacaaggcgcagctctcggccggcgacttcctgttcgtctga
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