Methylorubrum extorquens CM4: Mchl_4720
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Entry
Mchl_4720 CDS
T00809
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mchl_4720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mch03019
]
Mchl_4720
Messenger RNA biogenesis [BR:
mch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mchl_4720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B_3
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ACK85494
UniProt:
B7KQV3
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Position
5005790..5007040
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AA seq
416 aa
AA seq
DB search
MRVRIHRGTREIGGTCVELEHGGARLLLDLGLPLDGDPDDTSRHPAINGLTGGGDLLALV
LSHGHRDHVGLSHLAGPDLPVAMGTATLRILRAAAAFVPDSYVPTNTVTFTDGQALRFGP
FTVTPILVDHSAYDAYALLVEAGQQRLLYSGDLRAHGRKGALFERLVRDPPRGIDTLLLE
GSSLGRLDDDRTFPTEADIEDRFIGLFADTEGLALVAASAQNIDRVVSLYRACKRTGRTL
VLDLYAAEVLAATGNPRIPQSDWPGVSVFVPQHQRVRIKRTGRFDLIERHGANRIFGEQL
GALAPRAALLFRHSLLPDLDRADCLTGARAIWSQWAGYLGQPRGQALVTDLATRAIPLSY
AHTSGHASIPDLKRLAEAIAPRQLVPVHTFEPERFPALFGSRVTIREDGQWWETAA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgcgcatccaccgcggcacgcgcgagatcggcggcacctgtgtcgagctggag
cacggcggcgcccgcctgctgctcgacctcggcctgccgctggacggcgaccccgacgac
acgagccgccacccggcgatcaacggactgaccggcgggggtgatctcctcgcgctcgtt
ctcagccacggccaccgcgaccacgtcggactgagccacctcgccgggccggacctaccc
gtggcgatgggcaccgcgactctgcgtatcctccgcgccgccgccgccttcgtcccggac
agctatgtcccgacaaacaccgtcaccttcaccgacgggcaggcgctccgcttcggcccg
ttcaccgtcacgccgatcctcgtcgaccactcggcctacgacgcctacgccctgctggtg
gaggcaggtcagcaacggctgctgtactccggcgacctgcgcgcgcacgggcgcaagggc
gcgctgttcgagcgcctcgtgcgcgacccgccgcgcggcatcgacaccctgctgctggag
ggatcgagcctcggccgcctcgacgacgaccgcacctttccgaccgaggccgacatcgag
gaccgcttcattggcctgttcgccgacaccgaaggcctagcactggtcgcggcatcggct
cagaacatcgaccgcgtcgtctccctctaccgcgcatgcaagcgcaccggccgcacgctg
gtgctcgacctctacgccgccgaggtgctggccgcgaccggcaacccgcgcatcccgcaa
tccgactggccgggcgtcagtgtcttcgtgccccagcaccagcgtgtgcggatcaagcgc
accggccgcttcgacctgatcgagcggcacggagccaaccgcatcttcggcgagcaactc
ggggcactcgcgccccgcgccgccttgctgttccgccactcgctgctgcccgacctcgac
cgagccgactgtctgaccggcgcacgggccatctggtcgcagtgggccggctatctcggc
cagccccgaggccaagctctcgtcaccgatctggctacccgcgccattccgctcagctac
gcccacacctcgggtcacgccagcatcccggacctcaagcgcctggcagaggcgatcgcg
ccccgacagctcgttccggtccacaccttcgaacccgagcgcttcccggcgctgttcggg
tcacgcgtcacgatcagagaggacggacaatggtgggagacggcggcatga
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