Methylorubrum extorquens CM4: Mchl_4903
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Entry
Mchl_4903 CDS
T00809
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mch
Methylorubrum extorquens CM4
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_4903
Enzymes [BR:
mch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mchl_4903
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Mchl_4903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ACK85668
UniProt:
B7KSK0
LinkDB
All DBs
Position
5219589..5222732
Genome browser
AA seq
1047 aa
AA seq
DB search
MSASAAPRVFTIPPGAPFLPTLADALVSGRLVGAVGGDPFALASVTLYLPTQRAVRALST
VLAQRLGGAALLPRMIPLGEADEAELDLSSNTLLETPEDLLYPSIPALERRLILARLVQK
WAETVDRELLPIDDEVPFLVPSSPADAVALAADLEGLMDALTVEGLPWSEIAAAVEAEHS
RYFRLTLDFLKIAAEHWPDILAARSLADPTARARRLVLAEADRLFRERPGDPVIVAGSTG
SVPATARLIAAVARLPRGAVVLPGLDLHLDAEGWEAIDGAGGKHDEIAHGHPQAILRALT
GPRGFAVERRDVETLGDLSPEAVAREKLLSQALRPAETTDAWAGLDAAERMTLAREGMAG
LAVVEAADEREEALVAALALRETLETPGATAALVTPDRGLALRVSAELARWGIAAEDSAG
LSLARSQAGRFARLVAELAAEVAPARVIALLAHPFVRLGLTRSEVVRAAAALEIGGLRGP
APIPKNSFDGMRAAVALQRNATERVPRAKKRLKPVDWDLAEDILDRLEIALDAFRTDLQP
EIGNLVALAAGHREACERMMGGAEESDADEADDPSLDTLDGLFDDLESAEQEELPGRFSD
YAAFFTALARDRTVACAQRSAHPRLRILGPLEARLLSVDRIVLGGLDETVWPVRQTTDAF
LNRPMRGDVGLSPPERRIGQAAHDFVQGLGTHDAVVTRAAKREGSPTVPSRFLQRLRAFG
GDAVWADAIARGQRLRGLAARLDRGQEAPPPRLKRPAPKPDPALFPERLSVTEIETLVRD
PYSIYARHILGLEALEPIAVVPGAAERGSLIHKVLGDFSQAHPGALPADAETLLYAIAFD
AFGPLQDQYPELYAEWFPRYERMAVAFLEWEASQRQGLHTIHAERSGKVTIPLGERTFTL
SARADRIEARADGSYCIVDFKTGTPPSNRTVFAGFSPQLTLEAAMLMHGAFEGLKAASPP
DLLYVYASGGREPFRPIPVKPPPGDARAVEAVVEEHWQRLRGLIARYMTGEAAYLSRPYP
QYERAYNEYDHLARVLEWSLAGQGEAA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccagcgccgccccccgcgtcttcacgattccccccggtgcgccgttcctgccg
acgctggcggacgcgctcgtgtcgggccgcctcgtcggcgcggtcggcggcgatcccttc
gcgctcgcctcggtgacgctctatttgccgacgcagcgcgcggtgcgcgcgctctcgacc
gtgctggcgcaacgcctcggcggagcggccctgctgccgcggatgatcccgctgggtgaa
gccgacgaggcggagctcgacctctcgtccaacaccctgctggagacgccggaagacctg
ctctacccctcgatccccgcgctggagcgccggctgatcctggcccggctcgtccagaaa
tgggcggagacggtggaccgcgaactcctgcccatcgacgacgaggtgcccttcctcgtt
ccgtcctcccctgccgacgcggtggcgctcgccgccgacctcgaagggctgatggacgcg
ctcaccgtcgagggcctgccctggagcgagatcgccgcggcggtggaggccgagcattcg
cgctatttccgcctcaccctcgacttcctgaagatcgccgccgagcactggcccgacatc
ctcgccgcccgctccctcgccgaccccaccgcccgcgcccgccgcctcgtgcttgccgag
gccgaccggctgttccgcgagcggccgggcgatccggtgatcgtggcgggctccaccggc
tcggtgccggccaccgcccggctgatcgcggcggtggcccgcctgccccgcggcgcggtg
gtgctgccggggctcgacctgcacctcgacgcggagggctgggaggcgatcgacggcgcc
ggcggcaagcacgacgagatcgcccacggccatccgcaggcgatcctgcgggcgctgacc
ggaccgaggggctttgccgtcgagcgccgggatgtcgagacgctgggggatctctcgccc
gaggcggtggcgcgggaaaagctgttgtcgcaggccctgcgcccggccgagaccaccgat
gcctgggccggcctcgacgcggccgagcggatgaccctcgcgcgggagggcatggcgggc
ctcgccgtggtcgaggcggcggacgagcgcgaggaggcgctggtcgccgcgctcgccctg
cgcgagacgctggagacgcccggcgccaccgcggccctcgtcacgcccgaccgcgggctg
gccctgcgcgtctcggccgaactcgcccgctggggcatcgcggccgaggattcggcgggc
ttgagcctggcgcgctcgcaggccgggcgcttcgcccggctcgtcgccgaactcgccgcc
gaggtggcgccggcccgcgttatcgcgctcctggcccatcccttcgtgcggctggggctc
acccgcagcgaggtcgtgcgcgcggccgccgccctcgagatcggcggcctgcgcggcccc
gccccgatcccgaagaacagcttcgacggaatgcgcgccgcggtggcgctgcaacgcaac
gccaccgagcgggtgccgcgcgccaagaagcggctgaagccggtcgattgggatctcgcc
gaagacatcctggaccggctggagatcgcgctcgatgcgttccgcaccgacctgcagccc
gagatcggcaacctcgtggcgctcgccgccgggcaccgcgaggcctgcgagcggatgatg
ggcggggccgaagagagcgacgcggacgaggccgacgatccctccctcgacacgctcgac
ggcctattcgacgatctcgaatctgccgagcaggaagagctgccgggccggttctccgac
tacgccgccttcttcaccgcgcttgcccgcgaccgcaccgtcgcctgcgcgcagcggagc
gcgcatccgcgcctgcgcatcctcgggccgctcgaagcgcgcctgctctccgtcgaccgc
atcgtgctgggcgggctcgacgagacggtctggccggtgcgccagaccaccgacgccttc
ctcaaccggccgatgcgcggggatgtgggcctgagcccgcccgagcggcggatcggacag
gcggcccacgacttcgtgcagggcttgggcacccatgacgccgtggtcacccgcgcggcc
aagcgcgagggctcgccgaccgtgccgtcgcgcttcctccagcgcctgcgcgccttcggc
ggcgatgcggtctgggccgacgctatcgcccgcggccagcgcctgcgcgggctcgccgca
cggctcgatcgtggccaggaggcgccgccgccgcgcctcaagcgcccggctccgaagccc
gacccggctctgttcccggagcgcctcagcgtcaccgagatcgagacgctggtgcgcgat
ccctactcgatctacgcccggcacatcctgggcttggaggcgctggagccgatcgccgtg
gtgccgggcgcggccgagcgcggcagccttatccacaaggtcctcggcgatttctcgcaa
gctcatcccggcgcgctgccggcggacgcggaaaccctgctctacgcgatcgccttcgac
gccttcggcccgcttcaggaccagtacccagaactctacgccgagtggtttccccgctac
gagcgcatggcggtcgccttcctcgaatgggaggcgagccagcgccagggcctgcacacg
atccacgccgagcgctcgggcaaggtgacgatccccttgggcgagcgaaccttcacgctc
tcggcccgtgccgaccggatcgaggcccgcgccgacggcagctactgcatcgtcgacttc
aaaaccggcacgccgccgagcaaccgcaccgtctttgccggtttctcgccccagctcact
ctggaggcggcgatgctgatgcatggcgccttcgaggggctgaaggccgcctccccgccg
gacctcctctacgtctacgcctccggcgggcgcgagccgttccggccgatcccggtcaag
ccgccgcccggcgatgcgcgggctgtggaggccgtcgtcgaggagcattggcagcgcctg
cgcggattgatcgcccgctacatgaccggcgaggccgcctacctgtcgcgcccctatccg
caatacgagcgcgcctacaacgagtacgatcacctcgcccgcgtgctcgaatggtcgctg
gccgggcaaggagaagccgcgtga
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