Methylorubrum extorquens CM4: Mchl_4904
Help
Entry
Mchl_4904 CDS
T00809
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mch
Methylorubrum extorquens CM4
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_4904
Enzymes [BR:
mch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mchl_4904
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Mchl_4904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACK85669
UniProt:
B7KSK1
LinkDB
All DBs
Position
5222729..5226172
Genome browser
AA seq
1147 aa
AA seq
DB search
MNAPLTGFTVDDLTKAAQRRAADPRLSAWVSANAGAGKTKVLTDRVLRLLLDGAPPGRIL
CLTFTKAAAANMSIRVFQRLGRWVTLDDAALTAELTELTGERPARDTLRLARRLFARAVE
TPGGLKIETLHALCERLLHMFPFEANVPARFVVLDDNQSREAFEIETDNVLADAILGGNQ
ALSDALAVVGAEASGDTLRDAIRSAMRTRALFSDHRALEPALARLPRALALPDGASIETI
EAEILKGSSLGDWREIAGRLRTGKATDEKLADGLVEAHAALGAGKALASYRSVFFTDKDE
PRAAKSFGTKAVPEDIKQALLDEQARLIPLFDALRAARALARTLGLFRLAAEIHRRVEAQ
KTRLGALDFDDLIHKTLDLLSRVGASWVLYKLDRGVDHVLVDEAQDTNPQQWEILRTLTA
EFAAGEGARGLTRTRFAVGDPKQSIYSFQGADPREFELTRRAWGRAAEGAGHDFADVSLR
LSFRTASHVLAAVDAVFGVPDHFAGLSFDAGAPGTVHASARAGVPGAVELWGIEEPAEAE
EPDAWAAPVDAPEPNAPAIVVARRIARAVKTWTTKGDACGRIWRPGDVLILVRKRSAAFE
EVIRAMKGLGVPVAGQDRLEVAGHIAVLDLVAVGRAGLLPADDLTLATALKTPLVGLTDD
DLTRICARRPFAETLEDALTRHAQAGDGAAIRGLAALRLWIQLAAENGPFGFYAALLGPH
GGRSRLVARLGGEAGDAIDVFLAQAADAENGGDAPCLDAFLADYIVRPGRGRSGLSVKRD
LESGRNEVRVMTVHGAKGLEAPVVVVIDGCEPLGRNDPPLLGLDSTADGPLPPVWTGGRT
QDCAATLAARFALQARAREEHNRLLYVAMTRAADHLVIAPYRGATRETPASWCEMVRIGL
ERGLGAGEAVETEHGPITIWRDGSTASLAAAAADTAPPEPEVVPDWLFSAAAPEAEAAPP
LSPSGALGAADGQRQPRRRLGDAEARRRGALVHSLLEHLPRIEPARRAEAADRFARARAP
TLEEAKRKDLVRAVLRLIEAPDLAPLFSDQARAEVALSGRIVVEGIERDVTGRIDRLVVE
DGRVILCDFKTGRPPADDAPLPEREAAQVSLYARLAAAIWPEHAIVALLVWTSGPVVRRV
EGALLGQ
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccccgctgaccggcttcaccgtcgatgacctgaccaaggcggcccagcgccgg
gccgccgacccgcgcctctcggcctgggtctcggccaatgccggcgcgggcaagaccaag
gtgctcaccgaccgggtgctgcgcctgctcctcgacggcgcgccgcccggccgcatcctc
tgcctcaccttcaccaaggcggcggctgccaacatgtcgatccgcgtgttccagcgcctc
ggccgctgggtgacgctggacgacgcggcgctgaccgcggaactcaccgaactcaccggc
gagcggcccgcccgcgacaccctgcggctggcccgccgcctgttcgcccgcgccgtcgag
acgccgggcggcctcaagatcgagacgctgcacgctctgtgcgagcggctgctgcacatg
ttcccgttcgaggccaacgtgccggcccgcttcgtcgtgctcgacgacaaccagtcgcgc
gaggcgttcgagatcgagaccgacaacgtgctcgccgacgccatcctcggcggcaaccaa
gcgctgtccgacgcgctcgccgtggtcggcgcggaagcctccggcgacaccctgcgcgat
gcgatccgctcggccatgcggacgcgggcgctgttctccgaccaccgcgccctggagccg
gcgctcgcccgcctgccgcgcgccctggcgctgccggacggcgccagcatcgagacgatc
gaggcggagatcctgaagggcagcagcctcggtgactggcgcgagatcgcgggccggctg
cgcaccggcaaggcgacggacgagaaactcgccgacgggctcgtggaggcgcatgccgcc
ctcggcgcgggcaaggcgctggcgtcctaccgttcggtcttcttcaccgacaaggacgag
ccgcgcgcggccaaatccttcggcaccaaggcggtgccggaggacatcaagcaggcgctg
ctcgacgagcaggcccggctgatcccactcttcgatgccctgcgcgccgcccgcgcgctc
gcccggacgctcggcctgtttcggctcgccgccgagatccaccgccgggtcgaggcgcag
aagacgcgtctcggcgccctcgacttcgacgacctgatccacaagaccctcgatctgctc
tcgcgggtcggcgcctcctgggtcctgtacaagctcgaccgcggcgtcgatcacgtcctc
gttgacgaggcgcaggacaccaacccgcagcaatgggagattctgcgcacgctcaccgcc
gagttcgcggcgggcgaaggcgcgcgcggcctcacccgcacccgcttcgccgtgggtgat
ccgaagcagtcgatctacagcttccagggcgccgacccgcgggaattcgagctgacccgc
cgggcctggggccgggcggcggagggcgccgggcacgacttcgccgatgtcagcctgcgg
ctctcgttccgcaccgcgagccatgtgctcgccgcggtcgacgccgtgttcggcgtgccg
gatcatttcgccggcctctccttcgatgcgggcgcgccgggcaccgtccacgcctccgcc
cgcgccggcgtgcccggcgcggtcgaactctggggcatcgaggagccggcggaggcggag
gaacccgatgcctgggccgccccggtcgatgcgccggagcccaacgcgccggccatcgtc
gtcgcccgccgcatcgcccgcgcggtgaagacctggacgacgaagggcgatgcctgcggc
cggatctggcggcccggcgacgtgctgatccttgtgcgcaagcgctcggccgcgttcgag
gaggtgatccgggcgatgaaggggctcggcgtgccggtggcgggccaggaccggctggag
gtcgcgggccacatcgcggtgctcgatctcgtcgcggtcggccgcgccggcctgctgccc
gccgacgacctgacgctcgccaccgccctcaagaccccgctcgtcggcctcaccgacgac
gacctcacccgcatctgcgcccgccgccccttcgccgagacgctggaagacgcactgacc
cgccacgcgcaggccggcgatggggcggcgatccgcggtctcgcggccctgcggctctgg
atccaactcgcggcggagaacggcccgttcggcttctacgccgccctgctcgggccccat
ggcgggcgcagccggctggtggcgcggctcggcggtgaggcgggcgatgccatcgacgtg
ttcctggcccaggccgccgacgccgagaatgggggtgatgccccctgcctcgacgccttc
ctcgccgattacatcgtccggcccggccgcggccgaagcggtctctcggtcaagcgcgat
ctggaatcgggccgcaacgaggtgcgggtgatgacggttcacggcgccaagggcctggag
gcgccggtcgtcgtggtcatcgacggctgcgagccgctcggccgcaacgacccgccgctg
ctcggcctcgactccaccgccgacggcccgcttccgccggtctggaccgggggacgcacg
caggattgcgcagcgacgctggctgcccgctttgccctccaggcgcgggcgcgggaagag
cataaccgcctgctctacgtcgccatgacccgggccgccgaccaccttgtcatcgcgccc
tatcgcggcgcgacccgggagacgccggcctcgtggtgcgagatggtccgcatcggcctg
gagcgggggctgggggccggtgaagcggtcgagaccgagcacgggccgatcacgatctgg
cgcgacggctcgaccgcctcgctcgctgccgccgcggcggacacggccccgccggagccg
gaggtggtgccggactggctgttctcggctgccgcacccgaggccgaggccgcgccgccg
ctcagtccctcgggcgcgctcggcgcggcggacgggcagcgccagccccgtcggcgcctc
ggcgatgccgaggcccgccgccgcggcgccctggtccactcgcttctcgaacacctgccg
cggatcgagccggcccggcgggccgaagctgccgaccgcttcgcccgtgcccgcgcgccc
actctggaggaggccaagcgcaaggatctcgtccgcgcggttctgcggctgatcgaggcg
ccagacctcgcgccgctgttctcagaccaggcccgcgccgaggtcgcgctctcggggcgg
atcgtcgtcgaggggatcgagcgtgacgtcaccggccggatcgaccggctcgtcgtcgag
gacggccgggtgatcctctgcgacttcaagaccggccgcccgcccgcggatgacgcgccg
ctgccggagcgcgaggcggctcaggtcagcctctacgcgcggctcgctgccgcgatctgg
cccgaacacgcgatcgtggcgctgctggtctggacctcgggcccggtggtgcggcgggtg
gagggggctctgctcggacaatga
DBGET
integrated database retrieval system
