Methylorubrum extorquens CM4: Mchl_5249
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Entry
Mchl_5249 CDS
T00809
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mchl_5249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mch03019
]
Mchl_5249
03110 Chaperones and folding catalysts [BR:
mch03110
]
Mchl_5249
03029 Mitochondrial biogenesis [BR:
mch03029
]
Mchl_5249
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mch04147
]
Mchl_5249
Enzymes [BR:
mch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Mchl_5249
Messenger RNA biogenesis [BR:
mch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Mchl_5249
Chaperones and folding catalysts [BR:
mch03110
]
Heat shock proteins
HSP60 / Chaperonin
Mchl_5249
Mitochondrial biogenesis [BR:
mch03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Mchl_5249
Exosome [BR:
mch04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mchl_5249
Exosomal proteins of other body fluids (saliva and urine)
Mchl_5249
Exosomal proteins of breast cancer cells
Mchl_5249
Exosomal proteins of colorectal cancer cells
Mchl_5249
Exosomal proteins of bladder cancer cells
Mchl_5249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACK86011
UniProt:
B7KVS6
LinkDB
All DBs
Position
complement(5620326..5621966)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVRFSADARDKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELADRFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKYVAAGINPMDLKRGI
DLATAAAVKDITARAKKVASSEEVAQVGTISANGDKEIGEMIAHAMQKVGNEGVITVEEA
KTAETELDVVEGMQFDRGYLSPYFVTNAEKMVAELEDPYILIHEKKLSSLQPMLPVLEAV
VQTGKPLVIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGQT
ISEDLGIKLENVALPMLGRAKRVRIEKETTTIIDGLGEKADIEARVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGVALL
LAKKAVAELKSDIPDVQAGIKIVLKALEAPIRQIASNAGVEGSIVVGKITDNGGETFGFN
AQTEEYVDMIQAGIVDPAKVVRTALQDAASVAGLLVTTEAMVADAPKKDSGAPAMPGGGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaagacgtacgtttctccgccgatgctcgcgacaagatgctgcgcggcgtc
gacatcctcgcggatgccgtcaaggtgacgctcggccccaagggccgcaacgtcgtgatc
gagaagagcttcggcgccccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgccgaccgcttcgagaacatgggcgcacagatggtgcgcgaagtggcctcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgtgctggcccaggcgatcgtc
cgcgaaggcgccaagtacgtcgccgccggcatcaacccgatggacctgaagcgcggcatc
gacctcgccacggccgccgcggtgaaggacatcaccgcccgcgccaagaaggtcgcctcc
tccgaagaggtcgcccaggtcggcacgatctccgccaatggcgacaaggagatcggcgag
atgatcgcccacgccatgcagaaggtgggcaacgagggcgtcatcaccgtcgaggaggcc
aagaccgccgagaccgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacctc
tcgccgtacttcgtgaccaacgccgagaagatggtcgccgagctcgaggatccctacatc
ctcatccacgagaagaagctctcctcgctgcagccgatgctgccggtgctcgaggccgtg
gtgcagaccggcaagccgctcgtcatcatcgccgaggacatcgagggtgaggcgctcgcc
acgctcgtcgtgaacaagctgcgcggcggcctcaaggtcgcggccgtgaaggctccgggc
ttcggtgatcgccgcaaggcgatgctcgaggacatcgcgatcctcaccaagggccagacc
atctccgaggatctcggcatcaagctcgagaacgtcgccctgccgatgctcggccgcgcc
aagcgcgtccgcatcgagaaggagaccaccacgatcatcgacggtctcggcgagaaggcc
gacatcgaggcccgcgtcggccagatcaaggcgcagatcgaggagaccacctcggactac
gatcgtgagaagctccaggagcgtctggccaagctcgcgggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaggtcgaggtcaaggagaagaaggatcgcgtggacgacgcgctc
aacgccacccgcgctgcggtggaagagggcatcgtccccggcggcggcgtcgctctgctc
ctggccaagaaggcggtcgccgagctgaagtccgacatcccggacgtccaggccggcatc
aagatcgtcctcaaggccctcgaagccccgatccgtcagatcgccagcaacgcgggtgtc
gagggctccatcgtcgtcggcaagatcaccgacaacggcggcgagaccttcggcttcaac
gcgcagaccgaagagtatgtcgacatgatccaggccggcatcgtcgacccggccaaggtc
gtgcgtaccgcccttcaggacgcggcctcggtcgccggcctgctggtgaccacggaagcc
atggtcgccgacgcgccgaagaaggatagcggcgccccggcgatgccgggcggcggcggc
atgggcggcatggacttctaa
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