Methylorubrum extorquens CM4: Mchl_5381
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Entry
Mchl_5381 CDS
T00809
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch00061
Fatty acid biosynthesis
mch00071
Fatty acid degradation
mch01100
Metabolic pathways
mch01212
Fatty acid metabolism
mch02024
Quorum sensing
mch04146
Peroxisome
Module
mch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Mchl_5381
00071 Fatty acid degradation
Mchl_5381
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Mchl_5381
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mchl_5381
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mch01004
]
Mchl_5381
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mch04147
]
Mchl_5381
Enzymes [BR:
mch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Mchl_5381
Lipid biosynthesis proteins [BR:
mch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Mchl_5381
Exosome [BR:
mch04147
]
Exosomal proteins
Exosomal proteins of breast milk
Mchl_5381
Exosomal proteins of breast cancer cells
Mchl_5381
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACK86139
UniProt:
B7KX90
LinkDB
All DBs
Position
complement(5771525..5773249)
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AA seq
574 aa
AA seq
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MSQGAEQAFADHSGDELPPWRRHFPDVADWDGPVEIMTLPDLLAAGLARAGERPLITFRE
RTIGFPEFAARVDQLAAGLLTLGLTPGSVVGLHLPNTPFHPLAFFAAARAGLAVMHLSGL
DAPREIEHKLRVSGARVLITTNLPGFLPVALRFLDAGAADTILVGDDAEWGASMVAEPIA
IPKRTGLVSLAQLLTASIPAAWPQRQPGDVVLLQFTGGTTGLPKAAMLSQGNLTAAVSMH
RLWRDYLEPGETLDAFEASMRTIGVLPLFHIYALTVVLLRAVRGGGEILLRQRFDPGEII
ADIAVRRATFFAGVPTMWLALLNHPGIEAVDFSALRCCISGGAPLPFEAQTRLCRLLGRD
LVTGWGMTETAPAGTLLPRRALPRPGVIGIPFPKIRMRVVALDDPSRMVAPGETGELAIQ
GPNVFAGYLGQPEETQRAFCDDWFLTGDVGRVDELGVFDIIDRRKNMIISGGFNVYPVQI
EGAIYEHPDVAEVIVIGIPDAYLGQVPKAFVTLKPRAAPFTLEALADFLIERVGRYEIPR
ALELREALPRSPAGKLLASVLVAEERAKGETQEA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtgcagaacaggcctttgccgaccattccggggacgagttgccgccctgg
cgccgccatttccccgacgtcgcagactgggatggtccggttgagatcatgacgctcccg
gatctgctggcagcaggcctcgcgcgggctggcgagcgaccgctgatcacctttcgtgag
cgcactatcggctttcccgaattcgccgcgcgagtggaccagttggccgctggccttctg
accctcggcctcacgcctggatccgtggtcggcttgcacctgccgaacacgcccttccat
ccgctcgcgttcttcgcagccgcgcgagccggcctcgccgtaatgcacctgtccggcctc
gatgcgccgcgcgagatcgagcacaagctccgggtcagcggtgcacgcgttctcatcacc
acgaacctaccgggctttctgccggtcgcgctgcgctttctggatgccggtgctgccgat
acgatccttgttggggacgatgcggagtggggcgcctcaatggttgcagagccgatcgcg
atcccaaagcgaaccggcctcgtctcgctcgctcagcttctcacggcatcgatccccgcc
gcgtggccgcagcgccagcccggcgatgtcgttcttctgcagttcaccggtggcaccact
gggctgcccaaagccgcgatgctgagccagggcaatctcacggccgccgtgtccatgcat
cgactctggcgcgactacctcgaaccgggagagacgctcgacgccttcgaggcctcgatg
cggaccatcggtgtgctgccgctgttccacatctacgcgctgaccgtcgtgttgctgcgc
gccgttcgcgggggcggcgagatcctgctgcgacagcggttcgaccctggagagatcatc
gcggacatcgccgtcagacgcgccaccttcttcgcgggcgtgccgaccatgtggctcgcg
ctcctgaaccatcccggcatcgaggcggtcgacttctccgcgctgcgctgctgcatcagc
ggtggggcgccgctgccgtttgaggcgcagacccgcctctgccggctgctcggacgcgat
ctcgtcaccggctggggaatgactgagaccgcaccagccggaacgcttctgccacgacgg
gcgctacctcgccccggcgtgattggcattccgttccctaagatcaggatgcgcgttgtg
gcgctcgatgaccccagccgcatggtcgcgcccggcgagaccggcgagttggcgatccag
gggcccaacgtcttcgcaggctatcttggtcagccggaggagacgcagcgtgccttctgc
gacgactggttcctgaccggggacgttggccgagtagacgagttgggcgtgttcgacatc
atcgatcgacgtaagaacatgatcatctcgggcggcttcaacgtctatcccgtccagatc
gagggcgcgatttacgagcaccccgacgtggccgaggtgatcgtcatcggcatccccgac
gcctatctgggccaagttcccaaagccttcgtcaccctgaagcctcgcgccgcgccgttc
accctggaggctctcgcagacttcctgattgagcgcgtcggccgctacgagatcccacgc
gccctggagttgcgcgaagccctgccgcgcagccccgcaggcaaactcctcgccagcgtc
cttgtcgccgaggagcgagcaaagggagagactcaggaagcctga
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