KEGG   Momordica charantia (bitter melon): 111004788
Entry
111004788         CDS       T05045                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
mcha  Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111004788
Enzymes [BR:mcha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111004788
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    111004788
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C Helicase_dom4_arc ResIII LAMTOR
Other DBs
NCBI-GeneID: 111004788
NCBI-ProteinID: XP_022131663
UniProt: A0A6J1BQB6
LinkDB
Position
Unknown
AA seq 2171 aa
MASGSPPTRIDQFYASKKRKPLTPSLKSGSYEKDGKRTFEGSPGAKGTLDNYLVNSQDHG
NSDNPVRETLFAQDLVKRNLLLEINSSSKNEQEELALSRGSHTSEATQGIKKRTLQESYE
TGSSAVKAMASDWGVVPCTEKPELKQFAADFLSLYCSSEVQTTVSTPVEQKVTVQLRHSS
PTLLEGEAKLPKKTHSVAGPSNAKGKADTSREMCCGNMQSNFFVDTGDTDSSHPVVLKAC
QQKCSKAPRSPYCLTECQTPGLSTANARSRETPKSGSSTFSPGEAFWKEAIVFADGLCAP
SIDLTNYATEETKLVENQSNTKKLLIPKGEPSKKRLKGQFDEVGASSGVRLGEPGASKVS
LRSDLKDLSREVSSLPVKHFDFSAEDKNLDESTSPCCASNESKVNAHEVNVQSDCCYTTR
NSLAKHNVCNSDSLTNEKIHEMEVTSFVPEVTEAKVNIFSHSDSITSNTVVHELRASTVH
DVNKEMTPSSSIRHEDWLDLSCWLPPEICSIYKEKGISKLHAWQVECLKVDGVLQRRNLV
YCASTSAGKSFVAEILMLRRVISTGKMAFLVLPYVSICAEKAAHLDVLIEPLDKHVRSYY
GNQGGGTLPKDTSVAVCTIEKANSLVNRLLEEGRLSEIGIIVIDELHMVGDQTRGYLLEL
LLTKLRYAAGEGNLDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYH
TDFRPVPLEEYIKVGNTIYDKKLDIVRTISKTANLGGKDPDHIVELCNEVVEEGHSVLIF
CSSRKGCESTAKHVSKFLKKFSVELHNENSEFTDIFSAIDALRRCPAGLDPILEETFPSG
VAYHHAGLTVEEREIVETCYRRGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGA
RYRQMSGRAGRTGIDTKGESVLICRPEELKRINELLNESCPPLQSCLSEDKNGMTHAILE
VVAGGIVQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCHGKFLEWNEDTKLYSST
PLGRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERF
MGLPSLDQSVGNRVGVTEPFLMRMAHGAPVQRANITRNGVKSLRTKRDEHGSMYDVRPSE
EQTIRVCKRFYVALILARLVQETPIPEVCEAFKVARGMVQALQESAGRFASMVSVFCERL
GWHDLEGLVAKFQNRVSFGVRAEIVELTLIPYVKGSRARALYKAGLRTPLAIAEASDAEV
IKALFESASWTAEESTAQRRMHVGIARKIKHGARKVVLDKAEEARIAAFSAFKSLGLIVP
QISRPLSVSADGNITAQVAASIPSEIDTSNRVVGTAQMEHVSINSCFGGTSSFEKVGSKN
RSQTGAISVEVERSDFGTENHLVNVEGSSIQEQKTVVECAEKVDVAISNHVKKINDSINV
QDVYNKDVQGEQHGSNDLHLPRRDGSSMKGPMHAVSTFGGFESFLDLWDATQEFYFDLHY
TKRSVVNSVVPFELHGIAICWENSPVYYVNLPKDLLLSKSGKSLYPDDSTTGDQTDVSQY
ERQFEMVEKRWKRINEIFAKENVRKFAWNLKVQVQVLKCPAVSIQKLGYLNSARRSMGLE
LVDGSYLVLSGVHISNGIDMCIVAWILWPDDERNSTPNLEKEVKKRLSSEAAAAANRSGQ
WKNQMRRVAHNGCCRRVAQTRALYSVLWKLIISEELMEALNSVEIPLVSILADMETWGIG
VDMEGCIRARNLLGKKLRCLEKEAYRLAGMTFSLYAAADIANVLYGHLKLSIPEGFNKGK
QHPSTDKHCLDLLRYEHPIVPVIKEHRTLAKLFNCTLGSICTLAKLSARTQKYTLHGHWL
QTSTATGRLSMEEPNLQCVEHMVDFKISEDDVDHCKINARDFFISTQENWLLLSADYSQI
ELRLMAHFSKDSSLIELLSKPHGDVFTMIAARWTGKTEDSIGSHERDQTKRLVYGILYGM
GAKSLALQLECSRDEATEKIQSFKSSFPGVASWLHEAVAFCRQKGYVETLKGRRRFLSKI
NSPNSKEKSKAQRQAVNSICQGSAADVIKVAMINIYHVIGTDAPDLTQLPAANSNILRGH
CRIVLQVHDELVLEVDPSMVKEAAALLQISMENAASLLVPLQVKLKVGRSWGSLEPFVLD
HCKNEVLVPGS
NT seq 6516 nt   +upstreamnt  +downstreamnt
atggcgtccggctctcctcctacgcgcatcgaccagttttatgcttcaaagaaaaggaaa
cctcttactcccagtctgaagtctgggagttacgagaaggatggaaaaaggacatttgaa
gggtctcctggtgccaagggtacgttggacaattacctggtgaactcacaggaccatggc
aactctgataacccagttcgggagaccttgtttgcgcaagacttggtaaaaagaaactta
ttgttggaaattaatagttcctctaaaaatgaacaagaggaactcgctctgtctcgaggg
tctcacacttctgaagcaactcaaggaatcaaaaaaagaactctgcaggaatcgtacgag
accggaagttcagcagtcaaagctatggcaagtgactggggtgtcgtaccatgcacggag
aaaccagagcttaaacagtttgcagctgatttcttgtctctgtactgcagtagtgaagta
cagacgaccgttagtacgccagttgagcaaaaagtgactgttcagttgaggcattctagt
cctactctgttagaaggggaggctaagttaccaaagaagacgcattcagtcgctggccca
tcaaatgccaaaggcaaagctgatacctcaagggagatgtgctgcggaaacatgcagtcc
aatttttttgttgacactggggatactgatagcagtcatcctgttgtgcttaaggcatgc
cagcagaaatgcagtaaagcacctagatcaccttattgtttgactgaatgccaaacacca
ggcttgtcgactgcaaatgcacgttctcgtgaaactcccaagtccggaagctctacattt
tctcctggagaagctttttggaaagaagcaattgtgtttgcagatggtttgtgtgctcca
agcattgatcttaccaattatgctactgaagaaactaagcttgtagagaaccagagtaat
acgaagaaacttttaataccaaaaggggaaccttctaaaaaacggttaaaaggacagttt
gatgaagttggagccagcagtggagtcaggctgggggaacctggtgcttccaaagtttca
ttgaggagcgatttgaaagacttaagtagagaagtgtcttcacttcctgttaagcatttt
gacttctcagctgaagacaaaaatttggatgaaagtacatcaccttgttgtgcttcaaat
gaatctaaagttaatgcacatgaagttaatgtgcaatctgattgttgttataccactcgt
aacagtctagcaaagcataacgtctgtaacagcgactctcttacaaatgagaaaatacat
gaaatggaagtaacttcatttgttccagaagtgactgaagcgaaggtgaacatatttagt
cactctgatagtattacatctaacacagtggttcatgaacttagggcttccactgttcat
gatgttaacaaggaaatgacaccttcaagttctatcagacatgaagattggctagatcta
agttgctggctgccacctgaaatttgcagcatttacaaagagaaaggaatctcaaaactg
catgcttggcaggttgaatgtcttaaggtagatggtgtcttgcagagaagaaatcttgtt
tattgtgcatctactagtgctggaaaaagttttgtcgcagagattttaatgttacggcgg
gtcatttctactggaaaaatggcatttcttgtacttccatatgtatcaatttgtgcagaa
aaggcagcacatcttgatgtgcttattgaacctctggataagcatgtgcgtagttattat
ggaaaccaaggtggtggaacgcttcctaaggatacttctgtggctgtttgcacaattgag
aaggcaaactctttggtgaacagattgttggaagagggtcgtttgtcagaaattggaatc
atcgtgatagatgaattgcacatggttggggatcagacaaggggttatcttttggagctt
ttgttaacaaaacttcgttatgctgctggtgaaggtaatttagattctagcagtggcgag
agttctggtacaagcagtggtaagtcggaccctgctcatggtattcaaattgttggcatg
agtgcaaccatgccaaatgtggcagctgtggcagactggcttcaggctgccttgtaccat
actgattttcgacctgttccgttagaggagtacattaaagttggcaataccatttatgat
aaaaaattggatattgttagaacaatctcaaaaacagctaatcttggtggtaaggatccg
gatcacattgtagaattatgtaacgaggttgttgaggagggtcactcagtattaatcttt
tgctccagtcgaaaaggatgtgaatcaacagcaaaacatgtttcaaaattcctcaagaag
ttttctgttgaactccataatgagaacagtgagtttacagatattttttcggcgattgat
gcactgcgaagatgtcctgctggattggatcctatattagaggaaacctttccgtctggt
gttgcctatcatcatgctggccttactgtagaggaaagagagattgtcgaaacttgctac
cgcaggggtcttttgcgtgttttaactgctacatctaccttagctgctggagttaacctg
ccagctcgaagggttattttccgacaacctaggattggacgagattttattgatggtgca
aggtacaggcagatgtctggtcgggctggccggactggaatagatactaagggggagagt
gtactcatttgcagaccagaagagcttaaaagaattaatgaacttcttaacgagagctgt
ccaccactgcaatcatgtttgtctgaagataagaatggaatgactcatgcaattttagaa
gttgtggctggtgggattgttcaaactgcaactgatattcaccgatatgtaaggtgtact
cttctgaattccacaaaaccatttcaagatgtggttaaatcagcacaggaatctcttcgg
tggttgtgccatggaaaatttcttgaatggaatgaagataccaagttgtatagcagcaca
cctcttggacgtgcatcgttcggaagctctcttagtccagaagaatcacttattgttttg
gatgatctttcgagggcccgagaaggatttgtgcttgcatctgatttacatttggtgtac
ctagttacaccaatcaatgttgatgttgagccagattgggagttgtattatgaacggttt
atgggtctgccttctcttgaccagtctgttgggaatcgagtcggagtaacagaaccattt
ttgatgcgcatggcacatggtgcaccagttcaacgtgcgaacataacaagaaatggtgtc
aaaagtttacgtaccaagcgagatgaacatgggagcatgtatgatgtcagaccttcagag
gagcaaaccattcgagtgtgtaaacgattttatgtggctctcatcttggcaagacttgtt
caggaaactcccattccggaagtttgtgaagcttttaaagtcgctagagggatggttcaa
gcattacaagagagtgctggaagattcgcatctatggtttctgtattttgtgagaggctt
ggatggcatgatctggaaggtttagtagccaagttccaaaatcgtgtttcatttggagtg
agagcagagattgtagaacttactcttattccatatgttaagggttctcgagccagagca
ctctacaaagctggtttgcggacacctttagcaattgcagaagcatctgatgcagaagta
attaaagctctttttgagtcggcatcatggactgcagaagagagtacagcacaaagacgc
atgcatgttggaatagcaaggaagattaagcatggtgcacgtaaagtcgttcttgataaa
gccgaagaggctaggattgctgcattctctgcttttaaatcattggggttaattgtgcca
caaatttctcgtcctttgtcagtaagtgcagatggaaatataacagcacaagtggctgca
agtattccctctgaaattgatacttctaacagagttgttggcacagcacaaatggaacat
gtttcaataaattcatgttttggaggaacttctagttttgaaaaagtaggtagcaagaac
cggagtcaaactggagcaatttctgttgaagtcgaacggtctgattttggcactgagaat
catctggtgaatgttgaagggtcttcgatccaggagcaaaaaactgtggttgaatgcgca
gaaaaggtagatgttgcaatctctaatcatgtgaaaaaaattaatgattcaatcaatgtg
caagacgtgtataataaagatgttcaaggggaacagcatggcagcaatgatttgcatctt
cccagaagagatgggtcttccatgaagggtcctatgcatgcagttagtacatttggtggc
tttgaatctttcttggatttgtgggatgctacccaggaattttattttgatcttcattat
accaagcgatctgtagtgaattctgttgtcccctttgaattacatggaatagccatctgt
tgggaaaattccccggtgtattatgtgaaccttccgaaagacttgttattgtccaagagt
ggaaaaagtctttatccggatgacagcacaactggtgaccagacagatgtttcacaatat
gagcgccagtttgagatggttgaaaaaagatggaaaaggatcaatgaaatttttgcaaaa
gaaaatgtcagaaagtttgcatggaatttgaaagttcaggttcaggtgcttaaatgtccg
gcagtttccattcagaaattgggttacctgaactctgctcggcgtagtatgggtcttgaa
cttgtagatggttcatacttagtattgtctggagtccacataagcaatggaattgatatg
tgcattgtggcatggattctttggccagatgatgagagaaattcaacccctaacctggag
aaggaagtcaagaaaagattatctagtgaggctgctgctgctgctaataggagtggccag
tggaagaatcagatgagaagagtagcacataatggttgctgtcggcgtgttgcacagaca
cgagctctatattctgttctctggaagttaataatttctgaagaactcatggaagctctc
aatagtgtagagattccattggtaagtattcttgctgatatggaaacctggggtataggt
gttgacatggagggatgcattcgagcccgtaatttactgggaaaaaaactcaggtgcctc
gagaaggaagcttataggctagctggcatgaccttctccctgtacgcagcagcagatatt
gcaaatgttctgtatggacatttgaagctctcgattccagaggggttcaacaaaggcaaa
caacatcctagtactgataaacattgtttggacctgctgaggtatgaacaccctattgtt
ccagtcattaaagagcaccggacattggctaagctctttaactgtactttgggatccatt
tgcacgctagctaagctatctgcaaggacacagaaatacacgctacatggtcattggctc
caaacgtccacagcaactggtcggctttccatggaggagcctaaccttcagtgtgttgag
catatggtagatttcaaaataagcgaagatgatgttgatcattgtaaaattaatgctcgt
gattttttcatctctactcaggaaaattggttgctcttatcggcagattattctcagata
gagttgcggctgatggcacatttttcaaaagactcctcactgattgaactcctcagtaag
cctcatggggatgtttttactatgattgctgctagatggacagggaagacagaagactct
attggatctcatgagcgagatcaaactaaaagattggtatatggaatcctttatggaatg
ggggccaaatcacttgcattacaactggaatgtagtcgggatgaagcgacagagaagatt
caaagtttcaagagttctttccctggcgtggcttcatggcttcatgaggcggttgcattt
tgccgtcagaaggggtatgttgaaactcttaaaggaagaagacgcttcttgtcaaaaata
aattctccaaatagcaaagaaaaatcgaaagcacagcgacaagctgtgaattcaatttgt
cagggttcagcagctgacgtaattaaagttgctatgatcaacatttaccatgtcattgga
acggatgcaccagatcttacacagttacctgcagctaactctaacatcttgaggggtcac
tgccgaattgtgttacaggtgcatgatgagttagtgttagaagttgatccttccatggta
aaggaggcagcagctttgttacaaattagtatggaaaatgctgcctcacttctggttcct
ctgcaagtcaaattgaaagttggacgatcttggggttctttggagccattcgtgctagat
cactgcaagaatgaagttcttgtgccgggatcttga

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