KEGG   Momordica charantia (bitter melon): 111004793
Entry
111004793         CDS       T05045                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111004793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111004793
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111004793
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D2 GTP_EFTU_D3 MMR_HSR1 Zn_ribbon_RanBP GTP_EFTU_D4 Vps36-NZF-N POX zf-Sec23_Sec24 PBP1_TM
Other DBs
NCBI-GeneID: 111004793
NCBI-ProteinID: XP_022131677
UniProt: A0A6J1BRP6
LinkDB
Position
Unknown
AA seq 782 aa
MPRKVSHGLDYDEDYDDYEDYDYYDNDFEVEEKGKTHETKEETKGHKLWRCPICTYDNED
SFSACDICGVLRIPLVNNSNTRDDRTVENICKDSGVSIMAKSLFASSMPKQIPKSAVKFQ
EQNEEFVEEREGNIHKIGNIRGHLHEFHKAFSTRSQFRTNIVPFKFDIPSPDDVVSNGMR
SSKVGLKAVSHTEFNSSVFSSGITKEGANNATLTSKSASSAILPKGKLDSLGDSKSSTKS
SNSSGSSIGKSTAVVEERSTSISATMNLQSHDNRSSSTSTSKSAGKFGRTDESSNSSVER
EKPQNLASGLNNMVLNVKSAYANYINGLGKTSNVQYKHDKWMLPDQAADNLTQLNLAIVG
HVDSGKSTLSGRLLHLLGRVSQKEMHKYEKEAKSQGKGSFAYAWALDESAEERERGITMT
VGVAYFDSKRYHVVVLDSPGHKDFVPNLISGATQADAAILVIDASVGAFEAGLDSSKGQT
REHVQLIRSFGVDQIIVAVNKLDVVKYSKDRYDFIKLQLGTFFRSCGYKDSSLTWIPLSA
MANQNLVTAPSDAQFLSWYRGPNLLEAIDSLQPPTRDFSKPLLMPVCDVIKSLSLGQVSA
CGKLEAGALQSGSKVLVMPSGDKGTVRTLERNSQACKIARAGDNVTVTLQGVEASSVMAG
GVLCHPDFPVAVAKHLELKILTLEFATPILIGSQLEVHVHHAKEAARVARIVSLIDSKTG
KVAKKAPRCLSAKQSAVIEVVLPSPVCVEAFSTSRALGRVFLRALGRTIAVGIVTQLIGD
PE
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgcctcgtaaggtgagccacggtcttgattacgacgaagattacgacgactatgaggat
tatgattattacgacaacgattttgaagtagaagaaaaaggcaaaacacatgagactaag
gaagaaactaaggggcataagctttggcgatgtccaatttgtacttacgacaatgaagac
agtttttctgcatgtgatatatgtggggttctgcgcatccctttggtcaacaacagcaat
actcgcgatgatagaacagttgagaacatttgcaaagactccggagtatctataatggcc
aagtctctatttgcatcatcaatgccgaaacagatacctaaaagtgctgtaaaatttcaa
gagcagaatgaggaatttgtggaggaaagggaaggtaacatccacaagattgggaatatc
cggggccatttgcatgaattccataaggcttttagtacccgtagtcagttccgtactaat
atagtccctttcaagtttgatattccatccccagatgatgtggtttctaatggaatgcgt
tcctccaaagttggtttaaaagcggtcagccatacagagttcaactcttcagtattttct
tcaggcataactaaggaaggtgcaaataatgcaacattgacttcaaaaagtgcatcatct
gctatattgccaaagggcaaattagacagtctaggagatagtaaatcaagtaccaaaagt
tcaaacagctcgggctcctcaattggaaaaagtacagcggtcgttgaagagcgtagtaca
tcaattagtgcaactatgaacttacaatcacatgataacaggtcatcaagcacttccaca
tcaaagtctgcaggcaaatttggccgcacggatgagagcagtaactcttctgtggagcgg
gaaaagccccaaaatcttgccagtggtttgaacaacatggttctaaatgtcaaatctgcc
tatgcaaattatattaatgggctaggaaaaacgtcaaatgtgcagtataaacatgataaa
tggatgctgcctgatcaagctgccgataatttgactcagctgaatcttgctatagtcggt
catgttgattctggaaagtcaactctttctggaagacttttgcacctattgggacgtgta
tcccaaaaagaaatgcacaaatatgaaaaagaagcaaagtcccagggcaagggttccttt
gcttatgcctgggcactggatgagagtgcagaggaaagggagagaggaataactatgact
gttggtgttgcttattttgattccaaaaggtatcatgttgttgtgcttgattctccaggc
cataaagattttgttccaaacttgatatctggggcaacacaagccgatgctgcgattctt
gttatagatgcctctgttggtgcatttgaagccggtttggacagttcaaaggggcaaaca
agagaacacgtgcaattgatcagaagctttggtgttgatcagattattgttgcagttaac
aaactggatgtggtgaagtattccaaagatcgctatgactttattaagttgcaacttgga
acattttttcgttcttgtggttataaagattcatcattgacttggattccattgagtgcc
atggcaaatcaaaatctggtgactgccccttctgatgctcaatttttgtcctggtatcgt
ggacctaatctgttggaggcaattgattcccttcaaccacccaccagagatttctcaaag
ccactgcttatgccggtatgcgacgttattaaatcactttctctaggacaagtgtctgcc
tgtggtaaactggaagctggagctctccagtctggatccaaggttctagtcatgccatct
ggagataaaggcactgtgcgcactttagaacgcaattctcaggcgtgcaagattgctaga
gcaggagacaatgtgaccgttactctacaaggagtcgaagcaagtagcgtgatggctggg
ggagttctatgccatcctgattttcctgttgctgttgcaaaacatttggaattgaaaatt
ctcaccttggaatttgctacgccgatattgataggatctcagttggaagttcatgtacac
cacgcgaaggaggctgctagagttgcaaggatagtgtcgttgattgattcaaagacggga
aaggtcgcaaagaaggcgccgcgttgcctcagtgctaaacaaagtgcagtgattgaggtt
gttttgccaagtccagtttgtgtggaagcattctcgactagtcgggctctcgggagggtg
tttctgagagcgttgggcagaaccatagcggtcggcattgtgacccaactaattggagat
cctgagtaa

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