Momordica charantia (bitter melon): 111004793
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Entry
111004793 CDS
T05045
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111004793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111004793
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111004793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D2
GTP_EFTU_D3
MMR_HSR1
Zn_ribbon_RanBP
GTP_EFTU_D4
Vps36-NZF-N
POX
zf-Sec23_Sec24
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
111004793
NCBI-ProteinID:
XP_022131677
UniProt:
A0A6J1BRP6
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MPRKVSHGLDYDEDYDDYEDYDYYDNDFEVEEKGKTHETKEETKGHKLWRCPICTYDNED
SFSACDICGVLRIPLVNNSNTRDDRTVENICKDSGVSIMAKSLFASSMPKQIPKSAVKFQ
EQNEEFVEEREGNIHKIGNIRGHLHEFHKAFSTRSQFRTNIVPFKFDIPSPDDVVSNGMR
SSKVGLKAVSHTEFNSSVFSSGITKEGANNATLTSKSASSAILPKGKLDSLGDSKSSTKS
SNSSGSSIGKSTAVVEERSTSISATMNLQSHDNRSSSTSTSKSAGKFGRTDESSNSSVER
EKPQNLASGLNNMVLNVKSAYANYINGLGKTSNVQYKHDKWMLPDQAADNLTQLNLAIVG
HVDSGKSTLSGRLLHLLGRVSQKEMHKYEKEAKSQGKGSFAYAWALDESAEERERGITMT
VGVAYFDSKRYHVVVLDSPGHKDFVPNLISGATQADAAILVIDASVGAFEAGLDSSKGQT
REHVQLIRSFGVDQIIVAVNKLDVVKYSKDRYDFIKLQLGTFFRSCGYKDSSLTWIPLSA
MANQNLVTAPSDAQFLSWYRGPNLLEAIDSLQPPTRDFSKPLLMPVCDVIKSLSLGQVSA
CGKLEAGALQSGSKVLVMPSGDKGTVRTLERNSQACKIARAGDNVTVTLQGVEASSVMAG
GVLCHPDFPVAVAKHLELKILTLEFATPILIGSQLEVHVHHAKEAARVARIVSLIDSKTG
KVAKKAPRCLSAKQSAVIEVVLPSPVCVEAFSTSRALGRVFLRALGRTIAVGIVTQLIGD
PE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaggtgagccacggtcttgattacgacgaagattacgacgactatgaggat
tatgattattacgacaacgattttgaagtagaagaaaaaggcaaaacacatgagactaag
gaagaaactaaggggcataagctttggcgatgtccaatttgtacttacgacaatgaagac
agtttttctgcatgtgatatatgtggggttctgcgcatccctttggtcaacaacagcaat
actcgcgatgatagaacagttgagaacatttgcaaagactccggagtatctataatggcc
aagtctctatttgcatcatcaatgccgaaacagatacctaaaagtgctgtaaaatttcaa
gagcagaatgaggaatttgtggaggaaagggaaggtaacatccacaagattgggaatatc
cggggccatttgcatgaattccataaggcttttagtacccgtagtcagttccgtactaat
atagtccctttcaagtttgatattccatccccagatgatgtggtttctaatggaatgcgt
tcctccaaagttggtttaaaagcggtcagccatacagagttcaactcttcagtattttct
tcaggcataactaaggaaggtgcaaataatgcaacattgacttcaaaaagtgcatcatct
gctatattgccaaagggcaaattagacagtctaggagatagtaaatcaagtaccaaaagt
tcaaacagctcgggctcctcaattggaaaaagtacagcggtcgttgaagagcgtagtaca
tcaattagtgcaactatgaacttacaatcacatgataacaggtcatcaagcacttccaca
tcaaagtctgcaggcaaatttggccgcacggatgagagcagtaactcttctgtggagcgg
gaaaagccccaaaatcttgccagtggtttgaacaacatggttctaaatgtcaaatctgcc
tatgcaaattatattaatgggctaggaaaaacgtcaaatgtgcagtataaacatgataaa
tggatgctgcctgatcaagctgccgataatttgactcagctgaatcttgctatagtcggt
catgttgattctggaaagtcaactctttctggaagacttttgcacctattgggacgtgta
tcccaaaaagaaatgcacaaatatgaaaaagaagcaaagtcccagggcaagggttccttt
gcttatgcctgggcactggatgagagtgcagaggaaagggagagaggaataactatgact
gttggtgttgcttattttgattccaaaaggtatcatgttgttgtgcttgattctccaggc
cataaagattttgttccaaacttgatatctggggcaacacaagccgatgctgcgattctt
gttatagatgcctctgttggtgcatttgaagccggtttggacagttcaaaggggcaaaca
agagaacacgtgcaattgatcagaagctttggtgttgatcagattattgttgcagttaac
aaactggatgtggtgaagtattccaaagatcgctatgactttattaagttgcaacttgga
acattttttcgttcttgtggttataaagattcatcattgacttggattccattgagtgcc
atggcaaatcaaaatctggtgactgccccttctgatgctcaatttttgtcctggtatcgt
ggacctaatctgttggaggcaattgattcccttcaaccacccaccagagatttctcaaag
ccactgcttatgccggtatgcgacgttattaaatcactttctctaggacaagtgtctgcc
tgtggtaaactggaagctggagctctccagtctggatccaaggttctagtcatgccatct
ggagataaaggcactgtgcgcactttagaacgcaattctcaggcgtgcaagattgctaga
gcaggagacaatgtgaccgttactctacaaggagtcgaagcaagtagcgtgatggctggg
ggagttctatgccatcctgattttcctgttgctgttgcaaaacatttggaattgaaaatt
ctcaccttggaatttgctacgccgatattgataggatctcagttggaagttcatgtacac
cacgcgaaggaggctgctagagttgcaaggatagtgtcgttgattgattcaaagacggga
aaggtcgcaaagaaggcgccgcgttgcctcagtgctaaacaaagtgcagtgattgaggtt
gttttgccaagtccagtttgtgtggaagcattctcgactagtcgggctctcgggagggtg
tttctgagagcgttgggcagaaccatagcggtcggcattgtgacccaactaattggagat
cctgagtaa
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