Momordica charantia (bitter melon): 111004887
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Entry
111004887 CDS
T05045
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111004887
Transcription machinery [BR:
mcha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111004887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
111004887
NCBI-ProteinID:
XP_022131819
UniProt:
A0A6J1BRC1
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MGTSFRPNLKWAFQMQTHSRNCSPSKFYPHASKGREASFNSARLSFFSAICEEGESSSRE
TLKTYTCLSEAPQTSADDLLDLDEIEINSRARPLSHFHYGIKNTGPSKIEDNFSSCTSLP
TGKASHFGMLMENLDVLEEAFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSTSS
FLDLSDLPIEDGGGHNVNQKTDRQNDDIIVYSGKKVGRRSIKERARDKADKVASQPPATG
AAKEKFHNSARFPRKRVFNSRRRRLMVARNEAEMSTGVKVVANLERIRETLEKESEKRAS
MSCWADAAGIDIKDLHKQLQFGWFCQNELLRSTNSLVLFLAKKYRCTGLPMEDLVQAGAI
GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKAL
NNGSRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADTSIQSP
EETVKQKLMKKDIFNLLEGLEPRERQVLALRYGLQDFQPKSLEEIGKLLHVSKEWVRKIE
KKAMTKLKNEETTGNLCHYLD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaagtttcaggccaaatctcaagtgggctttccaaatgcagactcattcccgc
aactgctccccttccaagttttatccacatgcctctaaaggcagggaagcttctttcaat
tcggcaagactttccttcttctctgctatttgtgaggaaggggaatctagctctagagaa
accttgaaaacatacacttgcttgtctgaagctccgcaaacctcagctgatgatctgtta
gatttggatgagatagagataaacagtagagcaagaccactcagtcattttcattacggg
ataaaaaatactgggccatccaagatagaggacaatttttcttcctgtacaagcttgcct
actggcaaggcgtcacattttggtatgttaatggaaaaccttgatgttttggaggaagct
tttactgaatcaggcatgctaagcttggaaagagacattgtgctgcaactaacaaaactt
ggagctttggagttttttaatacctgtctatctaggactcttaaaacctcaacctcaagt
tttctggatttgtcagacttacccattgaggatggtggaggtcataatgttaaccagaaa
actgaccgccagaatgatgacatcatagtttactctgggaaaaaagtaggaagaagatca
ataaaagaaagagcacgggataaggctgataaggttgcttcccagccgccagcaacagga
gctgctaaagaaaaatttcataactcagctagatttccaagaaaaagagtgtttaattct
agaagaagaagactgatggttgcgcgaaatgaagctgaaatgtccacaggggttaaggta
gttgcaaatttagaaagaattagagaaactttagaaaaggaatctgaaaaaagagcaagt
atgagttgctgggctgatgctgctggcattgatataaaggacctgcataaacagttgcaa
tttggttggttctgccagaatgagcttttaaggagcactaattcattagttctatttctt
gcaaagaaatatcggtgcacggggttaccaatggaggacttagttcaggcaggagccatt
ggtgttctgcaaggtgtggaaagatttgaccctaaaaggggttttagattctcgacctat
atccaatactggataaggaaatcaatgtcaagagttgtggcgcgaaactcaaggggaatt
caaattccatggtcattaaccaaggcaataaatcagatacagaaagctcgaaaagccttg
aacaatggcagtagaagatattcggatgacgatatagcaaaggctactggtctacctttg
gccaaggttagggttgctagcaactgtttgaaagttgtgggttctgttgatcagaagatg
ggtgatggactaaatatgaaatatatggaatttacagcagatacgtcaatacaaagccca
gaagaaaccgtgaagcagaaactaatgaagaaagacatctttaatcttcttgaaggcttg
gagccaagggagaggcaggtcctggcactgcgatatggacttcaggatttccaacccaag
tcacttgaggaaattgggaaacttttgcacgtaagcaaggagtgggttcgaaaaatcgaa
aagaaagccatgacaaagctgaaaaatgaagagactacggggaatttgtgccattatttg
gattga
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