Momordica charantia (bitter melon): 111004898
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Entry
111004898 CDS
T05045
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111004898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcha04131
]
111004898
Membrane trafficking [BR:
mcha04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111004898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
111004898
NCBI-ProteinID:
XP_022131851
UniProt:
A0A6J1BQM1
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MLSVGIEDEEKWLAEGIAGIQHNAFYMHQAVDANNLREALKYSAQMLSELRTSKLSPHRY
YELYMRAFDELRMLEIFFKDESRHGVTVVDLYELVQHAGNILPRLYLLCTVGSVYMKSKE
VPAKEVLKDLVEMCRGVQHPIRGLFLRNYLAQVSRDILLDINSECEGDADTVMEAVEFVL
QNFTEMNKLWVRIQLQGPARLREKQEKERSELRDLVGKNLHVLSQIEGVDLEMYKQAVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGVCPQLQATVDIRMVLSQLMD
RLSNYAASNADVIPEFLHVEAFAKLSNAIGKVIEAQVDMPIVGAITLYVSLLTFTLRVHP
DRLDYVDQILGACVKNLSSQPKLEDTRATKQIVMLLSAPLEKYNDIVTALTLSNYPRVMD
HLDNATNKVMAMVIIQSIMKNNSCISTADKVEVLFELIKGLIKDLEEVTADELDEEDFKE
EQNSVARLLHMLHNDDPVEMLKIICTVKKHILCGGPNRLPFTVPPLILSALSLIRRLQNQ
DGDVVREEQGESGDVEEEMHATPKKIFQLLNQLIEALSSVPAPELALRLYLECAEAANDC
DLEPVAYEFFTQAFIIYEEEIADSKAQVTSIHLIIGTLQRMNVFGVENRDTLTHKATGYS
AKLLKKPDQCRAVYACSHLFWVDEPEGIKDGERVLLCLKRALRIANAAQQMANVTRGSSG
PVTLFVEILNKYLYYFEKGNQQITNAAIQGLIELITTELQTDSPSTTPASDAFFTSTLRY
IQFQKQKGGVMGERYDSIKV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgttatcggtcggaattgaggatgaagagaaatggctggcggagggaatcgccggcatt
caacacaatgccttctacatgcatcaagccgtggatgcgaacaatctcagagaagccctt
aaatactcggctcagatgctctcggagcttcgaacttcgaagctttcaccacatagatat
tacgaactctatatgcgagccttcgacgaattgaggatgttggagatttttttcaaggac
gaaagtaggcatggcgtgacggtggtcgatctttatgagctagttcaacacgccggaaac
atactgccaagactgtatctcctttgtacggttggctcggtctacatgaaatctaaggag
gtcccagcgaaggaggtcctcaaagatctcgtagaaatgtgtcgtggagttcaacatcca
atacgtggtctctttctaagaaactatctagcccaagtcagtagagacatattgctagat
attaattctgagtgcgaaggagatgcggacactgtcatggaggctgtagaatttgtgcta
cagaattttactgaaatgaataaactctgggtgcgaattcagcttcagggacctgctcgg
ttgagagagaagcaggaaaaagaaagaagcgaacttcgtgatcttgtaggaaagaatctc
catgttctgagtcagatagagggtgtggaccttgaaatgtacaagcaggctgttctacct
agagtcttggagcaggtggtcaactgcaaagatgagttagctcaatactatctgatggat
tgcattatacaggtgtttccagatgaataccatttacagacgcttgagacattgttgggt
gtttgcccgcagcttcaggcaacagttgatatcaggatggttctatctcaattaatggat
agactatcgaactatgctgcttcaaatgcagatgtaatacctgaatttctgcatgtagaa
gcctttgctaagttgagcaatgccattgggaaggtaatagaagcacaggttgacatgcct
attgttggggctataacattgtacgtctcccttctgacatttacccttcgtgttcatcca
gaccggcttgattacgtggaccaaatattgggagcatgcgttaagaacctctccagccaa
ccaaagcttgaagatactagagcaacaaaacaaatagtcatgcttctcagtgctccatta
gagaaatataatgatatcgtgacagctcttacactctcaaattatcctcgtgtcatggac
cacctggacaatgccacaaacaaagttatggccatggtcatcattcaaagtataatgaaa
aataactcttgcatttccactgctgataaggttgaggtgttgtttgaactaataaaaggg
cttatcaaggacttggaagaagttactgccgatgagctcgacgaagaggatttcaaggaa
gagcaaaattctgttgcccgcctcctacacatgctacataatgatgacccagtggaaatg
ttaaagattatatgtaccgtgaagaagcatattttgtgtggaggaccgaatcgcctgcct
ttcactgttcctcccctgatattgtctgctctcagtttaattagacggttgcaaaatcaa
gatggggatgtggtgagagaagagcaaggtgaaagtggggatgtggaagaagaaatgcat
gctacaccaaagaaaatattccagcttttgaatcagcttattgaggctctttcctctgtt
ccagctcctgaactggcattaaggttatacctggaatgtgctgaggcagcaaatgactgt
gatcttgagcctgttgcgtatgagttttttactcaagcatttataatctacgaagaagag
attgcggattccaaggctcaagtaacttcaatacaccttatcattgggaccctccagagg
atgaacgtgtttggtgtggagaacagagatactctgacacacaaggctactgggtattct
gcgaagctcctcaagaaaccggatcaatgtagggctgtttacgcatgctcgcatctcttt
tgggttgatgaaccagaaggcattaaggatggagagagagttcttctttgcctaaagcgt
gccctacgaattgcaaatgctgctcaacagatggctaatgttacacggggtagcagtgga
cccgtcacacttttcgttgaaatactgaacaagtacctttactatttcgagaaaggaaac
cagcagattacaaatgctgcaattcaaggcttgattgaactaataacaacggaattacag
accgactccccaagcactactcctgcttcagacgctttctttaccagtacacttcggtac
attcagttccagaaacagaaaggtggtgtcatgggtgagagatatgattctatcaaggtt
taa
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