Momordica charantia (bitter melon): 111005034
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Entry
111005034 CDS
T05045
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111005034
Enzymes [BR:
mcha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111005034
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EAD10
Motif
Other DBs
NCBI-GeneID:
111005034
NCBI-ProteinID:
XP_022132072
UniProt:
A0A6J1BSU2
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All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MKFPDCFLLSLNLNTLGLSITHTLTLQQICVGKMHGEKLQKDLVRASQKQDICSVRRIGF
SAQQVRTVIKSKAVDMPPLGVQLYVTERQVVMDNGIVQVTFSNPDGIVIGIRYNGVDNLL
EILNDEYNRGYWDLVWSPSASTTGSFDVIKATSFEVIVENEDQVELSFTRKWDLSLEGKL
VPLEIDKRFVMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQR
SMPLPDDRSPPRGRALAYPEAVLLVDPVEPELQGEVDDKYQYSCDNKDSSVHGWISTDPP
VGFWLITPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGP
VFIYLNSTYDSSDAIQLWEDAKAQETIEVQSWPYSFPASDDFPKSNQRGNIGGRLLVKDR
YVSEDFIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADESGYFSINGVRTGDYNLYAWV
PGFIGDYRNDSLINISEGSEIDVGDIIYEAPREGATMWEIGIPDRSAAEFYVPDPNPGYV
NKLYLNHPDKFRQYGLWERYTELYPDADLVYTIGVSDYTKDWFFAQVTRKTENGTFKGTT
WQVKFKLDNVDRKGTYKLRIALASASLAELQVAVNDPKSKPAFSSGLIGRDNSIARHGIH
GLHWLYNVDIPANRLVAGDNVIFFTQPRSTSPFQAIMYDYIRLESPPPPSSAHALN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttccagattgctttcttttgtccttgaatctcaatacattgggtttgtcaatt
actcataccctgaccttacagcaaatatgcgttggcaaaatgcatggggaaaaactgcag
aaggacttggttcgagcttcccagaaacaggacatttgttctgtgagaaggattggcttt
tctgctcaacaagtcagaacagtaattaagtctaaggccgtcgacatgccgcctctgggt
gtgcaactatacgtcacagaacgtcaggtggtgatggataatggcatagttcaagtcacg
ttttcaaacccagatggcatagtgatcggaatccgatacaatggagtcgacaacttgctc
gaaattctcaacgacgaatataacagagggtattgggacctcgtgtggagcccatccgcc
tccacaactggatcgttcgatgtgataaaggctacgagttttgaggttatagtggaaaat
gaagaccaagtggagctctcctttacacgaaaatgggatctgtctctcgagggaaagctt
gtgcctttagagattgataaaaggtttgtaatgcttcggggttcgtcagggttctactct
tatgctatttaccaacacttgaaagaatggcctggtttcaaccttggtgaaaccagactc
gccttcaaactcagaaaagacaagttccactatatggccatggcagacaacagacagaga
tccatgccgctgccagatgaccggtctccgccaagaggccgagccctggcctatccggag
gctgtcctgctcgtcgaccccgtcgaacctgagctccagggagaggtggatgacaagtat
caatattcatgtgacaacaaagatagcagcgtccatggatggatatccactgacccgccg
gtcgggttctggctaatcacccccagcaacgagttccggtccggcggacccgttaagcag
aacctgacttctcacgtcggcccaaccacccttgctgtttttattagcgcccattacacg
ggagaggatctggtccctaaaatcggagcgggcgaggcgtggaagaaagtttttggtcct
gtgttcatctatctcaactcaacttacgattccagcgacgcaattcagctctgggaagat
gccaaagcacaggagacgatcgaagtccaaagttggccctacagcttccctgcttcggat
gattttccaaagtcaaaccagcgtggtaatatcggtggtagactcttagtcaaggatagg
tacgtcagcgaagacttcataccagcaaacggtgcgtttgttggcttagcgccaccagga
gacgtaggatcgtggcaaagagagagtaagggctaccaattttggagtagagcagatgaa
agtggatacttttctatcaacggcgtaagaactggcgactacaatctttatgcatgggtc
cccggtttcattggagattatcgaaatgattctctcatcaacatttcagaaggtagtgag
atagacgtgggtgacataatatacgaagctccgagagaaggggctacaatgtgggaaata
ggaatccccgatcgctcagcagcagagttctatgttccagatccaaatcctggctacgtc
aataagctctatcttaaccatcctgataagtttcggcagtatggtctgtgggaaagatac
acagaattgtaccccgacgcagacttggtatatacaattggcgttagtgattacactaag
gattggttcttcgcacaggtcaccaggaagacagaaaacggaacattcaaggggacaacg
tggcaagtgaagttcaagctggacaatgtggacagaaaaggaacttacaagcttcggatc
gctttggcttccgcttctctggcggaattgcaggttgccgtaaatgacccaaaatcaaag
ccagcgttctcgagtgggctgatcggaagggacaattcgatcgccagacacggaattcac
ggcctgcattggctctacaacgtggatattccggccaatcgcctcgtcgccggcgacaac
gtcatctttttcacgcaaccaaggagcaccagccctttccaagctattatgtacgattat
attcgtctggaatctcctccacctccctcctccgcccatgctttgaattaa
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