Momordica charantia (bitter melon): 111005192
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Entry
111005192 CDS
T05045
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111005192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111005192
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111005192
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111005192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
111005192
NCBI-ProteinID:
XP_022132308
UniProt:
A0A6J1BVW9
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY
NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL
LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP
DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
CTFRKLRDTFFNGSTKKYAGVLYGLGVESGQRTN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattttacccaaaggcgattcgattcaaatccgtgaggtgtggaacgacaatttg
gaggaggagttcgcacttatccgggaaattgttgacgagtttaattacatagccatggat
accgagtttcccggcgtggtgcttcgccctgtgggtgccttcaagaatatcaacgactac
aactatcagactctcaaggataatgttgatatgttgaagttgattcaattgggtcttacg
ttctctgatgagaatggaaacctcccgacttgtggaaccgataagttttgcatttggcag
ttcaatttccgcgagttcaacgttagtgaagatatttttgcgagtgattcgattgagctt
ctgcgccagtgtggtattgattttaagaagaacaatgaagagggtattgatgttaatcgc
tttggtgagcttctaatgtcttctggggttgtgttaaacgatggtgttaactgggtcacg
ttccacagtgggtatgattttggttacttgctcaaattgctgacttgccgaaccttgcca
gacacacaggcgggattttttgatttgatcaacatctattttcccatggtttatgatatc
aagcatttgatgaagttttgcaacagcctccatggtgggctgaacaagcttgcagagtta
ttagaagtggagaggattggagtttgtcatcaagcaggatcagacagtctgcttactgct
tgtacttttaggaagttgagggatacctttttcaatggatctacgaaaaaatacgcaggt
gttttgtatggtcttggtgttgaaagtggacagcgtactaattga
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