Momordica charantia (bitter melon): 111005443 Help Entry 111005443         CDS       T05045                                  Name (RefSeq) protein DDB_G0268328 isoform X1   KO K19026   spatacsin Organism mcha  Momordica charantia (bitter melon) Brite KEGG Orthology (KO) [BR:mcha00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mcha03400]     111005443 DNA repair and recombination proteins [BR:mcha03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      111005443 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  111005443 NCBI-ProteinID:  XP_022132626 UniProt:  A0A6J1BST4 LinkDB All DBs Position Unknown AA seq 1720 aa AA seqDB search MSLNSVHDPNLSVRDIDGIICTVGDIAEGGGEMAALATLMYAPSPIQDCLSSSGVNRHSS SSTQCTLENLRPLLQRFPTLCRALVTSGFQQDTTSNFLGPKLKNALSEYLHWRNGIFFSA GRDTSLLHMLPCWFPKAVRRLIQLYVQGPLGWQSFSGLPTGQTLWERDVYFSMNDEHSEI SPISWEATVQKHIEDELYDSSLKETGLGLEHNLHRGRALSSFNHLLAARVQKLKSDIQPG SATRQSNIQLDLQTLFAPLTPMEQSLLSSIIPLAITHFENSVLVASCAFLLELCGLSASM LRVDVAALRRIYSFYNSGQSFENFRQLSPKGSAFHPVPLESDKIGTLAQALADEYLHQES SSVTKPKGSSNSAPPKRCPQVLLFVLQNLEEVSLSQVVNGNSCGSWLLSGKGDGTELRNK QKAASHHWNFVTVFCRMHRLPLSSKYLALLARDNDWVGFLTEAHVGGYPFDTVIQVASKE FSDPRLKIHILTVLKAVQSRKNPGSSSYSDTEEKKGQTSLLDGNMYTPVELFTILAECEK KKNPGKALLIKAEELSWSILAIIASCFPDVSPLSCLTVWLEITAARETTSIKVNDIASQI AENVGAAVEATNTLSAGCRSPAIHYCRKNTKRRRTVDSISEDQSVRVMSDNFSASTGPST NVSGGFIVKEEGKIVKDRQRISVSYDSDEAPSTLSKMVSVLCEQQLFLPLLRAFEMFLPS CSLLPFIRALQAFSQMRLSEASAHLGSFSVRVKDEASYSHSNVEGEENTGTSWTGSTAVK AANAVLSVCPSPYERRCLLKLLAATDFGDGGFAATYYRRLFWKINLAEPSLRIDDGLHLG NQALDDASLLTALENNGHWEQARNWAEQLEASGGSWKSASHHVTETQAESMVAEWKEFLW DVQEERVALWGHCQALFIRYSFPALQAGLFFLKHAEAVEKDLPAKELHELLLLSLQWLSG MFTMSNPVYPLHLLREIETKVWLLAVESEAEMKNERDLNINSSSRECISRNSSSIIDSTA SMISKMDQHISTMKNKNMDKHEVRENSQTHHKSQVLDAGFSTAEGGNSKAKMRTKGSVLL RRPLVDFADMNTNPEDGCIPSTFKNDLQLQDENLKMDTSFSGWEERVGPAEVDRAVLSLL EFGQITAAKQLQQKLSPGQVLSEFLLVDAAFKLAAISTPNREVSMSLVDGDLCSVILSYG IPVDQYLNPLQVLEILATIFAEGGGRGLCRRVIAVVKAANVLGLPFSEAYNKQPIELLQL LSLKAQESFEEANFLVQTHSMPASSIAQILADSFLKGLLAAHRGGYMDSQKDEGPAPLLW RFSDFLKWSELCPSEPEIGHALMRLVITGQEIPHACEVELLILSHHFYKSSACLDGVDVL VALAATRVEAYVAEGDFPCLARLITGVGNFHALSYILGILIENGQLELLLQKFSAAVDTS SGSAEAVRGFRMAVLTSLKHFNSNDLDALAKVYSHFDMKHETAALLESQAEQSCEMWFRR YDKDQNEDLLDAMHYYIKAAEVHSSIDAGNKTRRSCAQASLVSLQIRMPDFKWLLQTETN ARRALVEQSRFQEALIVAEAYDLDQPSEWALVIWNQMFKPEILEEFVAEFVCVFPLHPSM LNDIARFYRSKVAARGDQSQFSVWLTGGGLPAEWAKYLGRSFRCLLKRTRDLRLCLQLAQ VATGFMDVINACTKALDKVPENAGPLVLRKGHGGTYLPLM NT seq 5163 nt NT seq  +upstreamnt  +downstreamnt atgtcactgaattctgttcatgatcctaacctcagtgttcgggatattgatgggattatt tgtactgttggtgacattgctgaaggaggaggagaaatggcagccctagcaactctgatg tatgcaccttccccaatacaagattgtttgagtagcagtggtgtaaaccgacatagtagc tcatcaacccaatgtactctcgaaaacctcaggccactcctgcaacgattccctacattg tgtcgtgccctagttacgtcggggttccagcaagatacaacttccaattttttgggtcca aaattgaagaatgctttatcagaatatctacattggcgtaatggcatctttttttctgct ggacgtgatacttctcttctacatatgctaccatgctggtttcccaaagcagttaggaga ttgattcagctctatgtccagggtcctcttggatggcaatcattctcaggtttgccaacg gggcagacattatgggagagggatgtttatttttcaatgaatgatgaacattccgaaatc agtccaatctcttgggaagcaaccgtacagaagcatattgaagatgagctgtatgattct tctcttaaggaaactggacttgggcttgagcataatttgcatcgtggacgtgcattatca tcttttaatcatcttcttgctgctagagttcagaaactaaaatcagatattcagccaggt tcagcaactcgacaatcaaatatacagttggatctacagactctttttgctcctctaaca ccaatggaacagtcacttctttcttctattattccacttgccattacgcattttgagaac tctgtgttagttgcttcatgtgcttttctcctggagctttgtggattatctgccagtatg ctccgtgtagatgtagcagctttaagacgaatatatagcttttacaattctgggcaatcc tttgagaatttcaggcaactttcacccaagggttctgcttttcatccagtacccctagaa tctgataaaatagggactcttgctcaagctctggccgatgagtatctacaccaggaaagt tcaagtgttactaagccaaagggttcttctaattcagcacctcctaaacgttgtccacag gtgcttttgttcgtcttacagaatttggaagaggttagcctttcccaagtggtcaatgga aattcatgtggatcatggctattaagtggtaaaggcgatgggactgagctgagaaataaa caaaaagctgcaagccatcactggaattttgttacggtcttttgtcggatgcatagactt cctctaagttcaaagtatcttgctttgttagcaagagataatgactgggttggattttta actgaggctcacgttggcgggtacccttttgacacagttatccaagtagcatcaaaagag ttcagtgatccacgtctcaaaatccatatattaactgtattgaaggctgtacagtcaagg aaaaaccctgggtcttcatcatactctgatactgaagagaaaaaaggtcaaacttccctt ttagatggaaatatgtatactccagttgaactttttacaattttagccgaatgtgagaag aagaaaaaccctggaaaagctctcttgataaaggcagaagagttatcctggtcaattttg gcaataattgcttcttgcttcccagacgtgtctccattatcctgtcttactgtttggcta gaaattactgcagcaagggaaactacatccattaaggtaaatgatattgcttcccagatt gcagaaaatgttggggcagctgtagaagctaccaataccctgtcagctgggtgtagatca cctgcaattcattactgccggaaaaataccaaacgaaggcgaactgtggattccatttct gaagatcaatcagtcagagtgatgtctgataatttcagtgcttcaacaggtccatcgact aatgtttcaggtggctttattgttaaggaagaaggaaagatagttaaggatcgccaacgt atttctgtttcatatgattcagatgaagcaccatcaactctgtccaagatggtttctgtg ctttgtgaacagcaattattcttgcctctattaagggcttttgaaatgttccttccttca tgttccctgctaccgttcatccgtgctcttcaggcgttttcacaaatgcgtttatctgaa gcttcagcgcatttaggttctttttctgtacgagttaaggatgaagcaagctactctcat tcaaatgttgaaggagaagagaatactgggacatcgtggactggatctactgctgttaag gctgctaatgcggtactgtctgtttgtccatctccatatgaaagaagatgcctactgaaa cttttagctgcaactgattttggtgatggaggatttgctgccacatattaccgacgactt ttttggaaaataaatttagcagagccttcattacgtatagatgatggcctgcaccttgga aatcaggctctagatgatgcatcacttttaactgcactagaaaataatggacattgggag caagcacgcaattgggcagagcaactggaagctagtgggggttcttggaaatctgctagc catcatgtcacggaaactcaggccgaatctatggtagcagaatggaaggaatttttatgg gatgttcaagaagagagagttgcattgtggggtcactgccaggcactcttcatcagatat tcctttcctgctttacaggctggattatttttccttaaacatgcagaagctgtggagaaa gatcttccagccaaggagcttcatgaactattgttactttccttacaatggttaagtggg atgtttaccatgtccaacccagtttatccattgcatcttctacgagaaattgagaccaag gtttggctgctggcagtagagtcagaagctgagatgaagaatgaacgggacctgaacatt aacagttccagccgggaatgtatatctaggaatagctcaagtattattgactcgactgca agtatgatatcaaaaatggatcaacatattagtacaatgaagaataaaaatatggataaa catgaggtgagagaaaacagccagactcatcataaaagtcaagtattagatgctggcttt tcaactgcagaaggggggaattcgaaggcgaaaatgagaaccaaaggttctgtgctacta cgacgaccattagtggactttgcagacatgaacactaaccctgaagatggatgtattcct tccacttttaagaatgacttgcagttgcaagatgagaacttaaaaatggacacttcattt tccgggtgggaagaaagggttggacctgcagaggtggatagagctgttctttcattgcta gagtttggtcaaattacggctgccaagcagctccaacaaaagctgtctcccgggcaagta ctgtcagaattccttcttgtggatgctgcttttaagcttgcagctatatcaacccctaat cgggaagtttccatgtctttggttgatggggatttatgttcagttattctttcatatggt attccagttgatcaatatcttaatccattgcaggttttggagattttagcaacaattttt gctgaaggtggtggacgtggactttgtagaagagtaattgcagttgtaaaggctgcaaat gtcttaggacttccattttcagaggcatataacaaacagcctattgaactattacagcta ctttctcttaaagcacaagaatcatttgaggaagcaaatttccttgtgcagactcactct atgcctgcttctagtattgctcaaattcttgcagattcctttctaaagggcttgttggct gcacatcgtggaggttatatggattcccagaaagatgaaggacctgcgcctctactatgg agattctctgacttcttgaagtggtcagaactttgtccttctgaaccagagattgggcat gcattgatgcgtttagttattactggacaagagataccgcatgcctgtgaggttgagctt ttaattttatctcaccacttctacaaatcttcggcttgccttgatggggtggatgttctc gtggctcttgctgccacaagagttgaggcttatgtagctgagggtgattttccatgttta gctcgactaataactggagttggaaacttccatgcccttagctatattcttggcattctt atagagaatggtcaactagaacttcttcttcaaaagttctcggctgctgtagatacaagt tcagggagtgctgaggctgtcaggggatttcgcatggctgttcttacatccctcaagcat tttaactccaatgatcttgatgcattggctaaggtctacagccattttgacatgaaacat gaaacggctgctcttttggagtcgcaggcagagcagtcttgtgagatgtggttccgccgt tatgataaggaccagaatgaagaccttttagatgcaatgcattactacattaaagctgct gaagttcattcttccattgatgctggaaacaaaacccgcagatcctgtgctcaggcttct ctagtgtcccttcaaattaggatgcccgactttaagtggctcttgcagacggaaactaat gccagaagagcccttgtcgagcaatcaagattccaagaggcactaattgttgctgaagct tatgatctcgaccagccgagcgagtgggctctagtcatttggaatcagatgtttaaacca gagattctagaagaatttgtggctgaatttgtttgtgtttttccactccatccttcaatg ttaaacgacattgcaagattttataggtccaaagtcgctgcccgtggggaccagtcccaa ttctccgtctggctaactgggggagggttgcctgcagagtgggcaaaatatttgggaaga tcatttagatgcttgttgaaaaggactcgggatttgaggctctgtttgcaactagctcaa gttgccactggtttcatggatgttattaatgcttgcacaaaagcgcttgataaggtaccc gagaatgccgggcctcttgtgctcagaaaagggcatggaggtacatatcttccgctgatg tga

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