Momordica charantia (bitter melon): 111005988
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Entry
111005988 CDS
T05045
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111005988
Spliceosome [BR:
mcha03041
]
Common components
Common spliceosomal components
General mRNP proteins
111005988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
111005988
NCBI-ProteinID:
XP_022133415
UniProt:
A0A6J1BV68
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS
RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE
RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR
DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY
QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL
LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP
VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES
VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS
LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE
ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA
KFKGA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtatgattacttggagaaagctgtggaggaccaggacaatagggac
tccaagaaggcgaagaagaatgagagtgagaggaatgagaaaagcagcagaaagagagag
gtagacgaggaagatggttccggtggccgcgaggatgaggaggtgaaggtcaagaggtcg
agaagcgagcatgaaaatgggaaggaggacagggatcagtcgggccgagggagggatcgg
catcggagagatagagaggaagaaacagatgcgggaaaagagaggaaccgtacgagagag
aggggtagcagtgagaaggagagggatagagacaggaacagagaggatagagatagagag
agacacaaggagaaggagagggagagagacagggacagaagggataaggatagagataga
gagagacacaaggagaaggagagggagagagacaaggatagaagggacaaggagagggac
aaggataaggagaaggagaaggagaaggagaaggagaaggagaaagagagagaaaggaga
gatagggagaggagggagcgggaaagagaagaggagagatcgcggcgaagcaggagtcgg
tctgttcgggagcgagaacgtgaagttgatgtcagagagaacaggagaatgaaggaaaag
aaagacatggtggagcctgaagctgatccagagagggatcaaagaactgtatttgcttat
cagatgcctttgaaggccactgagagagatgtttacgaattcttttcaaaagcaggaaag
gtgagagatgtacggctgattatggacaggaattctagacggtcaaaaggagttgggtat
gttgaattttatgatgcaatgtctgtgcccatggctatcgccctctctggtcaactactt
cttggccaacctgttatggttaaaccttcagaggctgaaaagaatcttgttcaatcaaat
acgtcaggcgcctctggtgcagggccatatggtgcagtagacaggaaactttatgttgga
aatttacatttcaacatgactgagactcaccttagagagatttttgaagcatttggtcct
gtggaacttgtgcaactacctcttgaccttgagtctggtcactgcaagggttttggattt
gttcaatttgctcatctggaacatgctaagtcagctcaaagcttgaatggaaaattagaa
cttgctggccgaaccatcaaggtttcatctgtaacagatcatattggagcacaagagagt
gttgctaaatcaaatgaccttgatgatgatgaagggggcggtctggttggtgcattgaat
gctcaatcaagagctctgcttatgcagaagcttgaccgcactggcattgcaactagtatt
gcagggtctcttggagcaccagtgttgaatgggtcagccccaaatcagagatcttccagc
ttgcctctaaatggtcaagctgcagtagctgcaccagcagtacttccagctaattttact
ccacctgttttacaatctgttggaagccctagtgaatgtctactactgaaaaatatgttt
gatccatcgacggagacggcaccggactttgacatggaaatcaaagaagacgttgaagag
gagtgttccaaatatggtcgcgttaaacatatatatgtggataaaaatagcgcaggatgt
gtgtatctgcaatatgatgctgtggaagctgctataaatgctcaacgtgcaatgcacctg
agatggtttgcaggcagacagatatcagtcttgttcatgcaatcgcaggtatatgaagca
aagtttaaaggagcttga
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