Momordica charantia (bitter melon): 111006059
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Entry
111006059 CDS
T05045
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111006059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111006059
03036 Chromosome and associated proteins [BR:
mcha03036
]
111006059
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111006059
Coactivators
SAGA/TFTC/STAGA complex
111006059
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111006059
STAGA complex
111006059
TFTC complex
111006059
SAGA complex
111006059
SLIK complex
111006059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
KNTC1_N
LisH
WD40_like
WD_LRWD1
PALB2_WD40
Thioredoxin_13
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
111006059
NCBI-ProteinID:
XP_022133497
UniProt:
A0A6J1BWV4
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MDEEQIANFVSAYLKKKGFKETEQAFLEELRHNKTNSSSSSSSIDLDFANHLLSFTEAEN
IPAKYLEGYSKLRSWAYNSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARTFFNRFRE
DHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRQSKVTIKICQYSYEMLLQYLHKTQTTVI
LGIINERINFQVFPGQPSSISDDAEIVTLTGGTQDTANQINQKEVQWGLLEDSLEERLEK
AAGLLSDSEKAEGETKDGDIDENKKRTTEGGKQGASVKKVKKDKTSSATGKTPRAEANPA
SMTPRVKPELALPTISTEVEQSILEDLRNRVQLSSVALPSVSFYTFINTHNSLNCSSISH
DGALVAGGFSDSSLKVWDMAKLGQQAGSTVLQDENDMSTSDQMTGNTSGKRSYTLFQGHS
GPVHSATFSPAGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASC
SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVR
IFIGHRSMILSLAMSPDGRFMASGDEDGTIMMWDLSTGRCVTPLIGHTSCVWTLAFSCEG
SLLASGSADCTVKLWDVTSSTKAPRTDENKSGTANRLRSLKTLPTKSTPVYSLRFSRRNL
LFAAGALSKSASTA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacaaatagcgaattttgtgtcagcgtacttgaagaagaagggtttcaag
gagacagaacaagctttcctcgaggagctgcgtcacaacaagaccaattcctcctcttca
tcctcttccattgacctcgacttcgccaatcacttactctccttcacagaagcagagaat
attccagccaaataccttgaaggatatagcaagcttaggtcctgggcttacaactcacta
gatttatacaagcatgagttgcttcgtgtgctatatccagtgtttatccattgtttcatg
gatcttgtggctaaaggacacattcaagaagctcgaacctttttcaatagattccgggaa
gatcatgaaatgatgcatctgcgagatctacaaaagttggaaggcgtactttctccctct
catttggaggagatggaattcgctcattctcttaggcagagcaaagtcaccataaaaatt
tgccagtactcctatgagatgctacttcaatatcttcataagacccaaaccacagtgata
cttgggattatcaatgaacgcatcaatttccaagttttccctggtcagcctagctcaata
tcggatgatgctgaaattgtgacactcactggaggcacccaggacactgccaatcagata
aatcaaaaagaagtccaatgggggttacttgaagattctttggaagaacgcttggagaaa
gctgctggtttgctttcagattctgaaaaggctgagggggaaaccaaggatggcgatata
gatgagaataagaaaagaacaaccgagggaggaaagcaaggcgcttcagttaaaaaggtc
aagaaggacaagacttccagtgcaactgggaaaactccaagggctgaagctaatcctgca
tctatgacaccacgagtgaagccagagcttgctttacccacaatttcaacagaggtggaa
caatctattctagaagatttgagaaaccgtgtgcagttgagttctgttgctctgccatca
gtcagcttttataccttcattaatacacacaatagtttaaactgttcatcaatatcgcat
gatggagctttagttgctggtggattttcagactcttctttgaaggtctgggacatggca
aagctaggacaacaagctggcagtactgttttgcaggatgaaaatgacatgtctactagt
gatcaaatgacaggcaatacaagtgggaagagatcttatacattatttcaaggtcattct
gggcctgttcactctgccactttcagtcctgctggggattttgttctttcctcctctgca
gacacgactattcgattatggagcacaaaactaaatgccaatcttgtttgctacaaaggt
cacaattaccctgtatgggatgttcagtttagtccggttggacattattttgctagttgc
tcacatgatagaactgcgaggatctggtccatggacagaattcaacctttaaggatcatg
gcagggcatctatctgatgtggattgcgttcaatggcatgccaactgcaactacatcgca
acaggctcaagtgacaaaacagttagattgtgggatgtccagagtggggaatgtgtccga
attttcattggtcacaggagtatgattctgtcgttggcaatgtcacctgatggtcggttc
atggcatctggtgatgaagatggtacgattatgatgtgggacctgtccactgggcgctgt
gttacaccattgattggacacacatcatgcgtttggacccttgctttcagttgcgagggc
tccctccttgcctcgggctctgcggattgcacggtaaaattatgggacgtaacttcaagc
acaaaggcaccaagaacggatgaaaacaaaagtggtactgccaatagacttagatccctg
aaaactctaccgaccaagtcgactccggtctacagtttacggttctctcggaggaatctt
ttatttgcagcaggggctctctccaaaagcgcatcaactgcttga
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integrated database retrieval system
