KEGG   Momordica charantia (bitter melon): 111006069
Entry
111006069         CDS       T05045                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03020  RNA polymerase
mcha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111006069
  09124 Replication and repair
   03420 Nucleotide excision repair
    111006069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcha03021]
    111006069
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111006069
Transcription machinery [BR:mcha03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111006069
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111006069
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 111006069
NCBI-ProteinID: XP_022133507
UniProt: A0A6J1BWW4
LinkDB
Position
Unknown
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRAHD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggagaggaggaagaaaatgcggcggagcttaaaattggggatgagttcttgaaa
gccaagtgtttaatgaattgtgaagtttctttgatccttgagcacaaatatgagcagctt
cagcagatgtctgaggatccaatgaatcaagtttctcaagtgtttgaaaagtcattgcag
tatgtgaaacgcttcagccgctataaaaatcctgatgctgttagacaagtacgagaaatt
ctgagcaggtatcagttggctgagtttgagctctgtgttcttggcaatctttgccctgaa
actgtggaggaagctattgccatggtaccatccttgaagactaaaggaagggcacatgat
gatgaagcgatcgagaagatgttgaacgatctttcgttgatcaaaaagtttgagtag

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