Momordica charantia (bitter melon): 111006547
Help
Entry
111006547 CDS
T05045
Name
(RefSeq) uncharacterized protein LOC111006547 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111006547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111006547
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111006547
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111006547
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111006547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
111006547
NCBI-ProteinID:
XP_022134244
UniProt:
A0A6J1BY94
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MLRPPASSSSQQLPNQSLASSANGLQNPVQIQPQNQGSFCNPNPHMSNVHGNHVPNMPPP
MFQPGLMMNFPNPLMALHNNPLAAAQFAPGHMGFALQNNGCNTNPAANFQAQGQFNMVPG
VNQMNMNPCLPLAQLFGQNMPNLVQQLNQNMGFSNGQFCLPYQNMNQHVIPGQMLNMSQV
NPQPSPHTSYGGPNQAVPMVLQNPAISTIQPFGVNQAMHQINQNPQNFTPPAMGGAGLKQ
FPGSAQPLQGNSTMPFNSSAQPQQARNLQSPAVVGSQGNSSINGGGNGPNSFSKNLDQKN
FTRNSKKGFQKNQIHHMKNEKKKFGFPGGQKGKGFHNDRRNKFGGACSTDQVKDQKRSLS
PVYTEQEIQQWREARRKNYPSSTNIWKKLTEKQADCTLVDKEAHLLRQELKEILAKQAEL
GVEVAEIPPEYLSYSEKRDNQKRRGDLLTREEAEGPLTGKEKSRNRSNKRGRPDKKSRPR
KKGKSERHLPNENANANVLPLIKREPTLLQKLLKTDVKREKSQLLQALRFMVMNSFFKEW
PNKPLKFPSVIIKENGGEINVVDENNSLSSVNFTLQETNNSIVEKLGNDNDNSHNDNDDD
NSGNDDIEKFKGCGMHVPEEEEGEIID
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtcctcctgcttcttcttcttcccagcagttacccaatcaatctctcgccagc
tctgccaatggacttcaaaatcccgtccaaattcagccccaaaaccagggttccttctgc
aatcccaacccccatatgagcaatgtccatggcaaccacgttcccaacatgccgccccca
atgtttcaaccgggattgatgatgaattttccaaaccctctcatggcgttgcataataat
cctcttgccgcggctcaatttgctccgggccatatgggttttgctttacagaacaacggg
tgcaacacgaacccagctgctaattttcaggctcaggggcaattcaacatggtgccgggt
gtgaatcagatgaacatgaacccgtgtttgcctctggcgcagttgtttgggcagaacatg
ccgaatttagttcagcaattgaatcagaacatgggtttttcaaatgggcagttttgtttg
ccgtatcaaaacatgaatcagcatgtaattcctgggcagatgttgaatatgtcgcaagtt
aatcctcagccgtctccccacacttcatatggtggtccaaatcaagctgttcccatggtt
cttcagaatcccgccatttctacaattcagccttttggtgtcaatcaggcaatgcaccaa
attaaccagaatcctcaaaacttcactccaccggcaatgggtggagctggcttgaaacag
tttccgggttcggctcaaccgttgcaagggaattcaaccatgccatttaactcttcggct
caaccacaacaagctaggaacttgcagtcacctgctgtcgttgggtcacagggaaattct
tcaataaatggtggtggaaatggaccaaattcattttcgaaaaatttagaccagaagaac
ttcacaaggaactcaaagaaaggatttcagaagaatcaaattcatcatatgaaaaatgag
aagaaaaagtttgggtttcctggcggacagaaaggaaaaggttttcacaatgataggagg
aacaaatttggtggcgcttgttctacagatcaagtgaaagaccagaagagatctctctct
ccggtctacacggagcaagaaattcagcaatggcgtgaagcacgccgaaagaattaccca
tcatcaaccaacatatggaagaaactcactgaaaaacaagctgactgcacattggtcgat
aaggaggctcaccttctgcgacaagaactcaaagagattttagcgaagcaggctgaattg
ggagttgaagttgcagaaataccaccagagtatctctcatattcagagaaacgtgacaat
caaaagcgacgcggagatctattaactagagaggaagcggaaggaccattgacagggaaa
gagaaatctcgaaacaggtcaaacaagaggggaaggcctgacaagaagagtcgtccgaga
aagaagggcaaatcagagaggcatttaccgaacgagaacgcgaatgcgaacgtgttgcca
ttaatcaagagagagccgacattattgcagaagctcttgaaaacagatgtgaagagagaa
aaaagccaactgttacaagctttgagattcatggtgatgaattctttcttcaaagaatgg
cccaataaaccattgaagtttccatcagttattatcaaggagaatggaggtgagatcaat
gtggttgatgagaacaactctctgtcttctgtgaatttcactctccaagagacaaacaat
tcaattgttgaaaaacttggcaacgacaatgacaacagccacaatgacaacgatgatgac
aacagcggtaacgacgacatcgagaagttcaaaggatgtggaatgcatgtacccgaagag
gaagaaggagaaattatcgattag
DBGET
integrated database retrieval system
