Momordica charantia (bitter melon): 111006662 Help Entry 111006662         CDS       T05045                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism mcha  Momordica charantia (bitter melon) Pathway mcha03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:mcha00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     111006662  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mcha03019]     111006662 Enzymes [BR:mcha01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      111006662 Messenger RNA biogenesis [BR:mcha03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      111006662 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 SRPRB ATP_bind_1 DUF1611 AAA_29 FtsK_SpoIIIE Motif Other DBs NCBI-GeneID:  111006662 NCBI-ProteinID:  XP_022134389 UniProt:  A0A6J1BYM6 LinkDB All DBs Position Unknown AA seq 438 aa AA seqDB search MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV SRNAKFRQKARSYRIREYFYGPANDFSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA GELPGKYLIMGTLTWLET NT seq 1317 nt NT seq  +upstreamnt  +downstreamnt atggcgtatggtggtccacccacagcggctggctcgggatcgacttcttcaatcagacag gtcaagctggatagagagagcgagctcaggattgaagttggaaacgactcacctctccgt ttgcggctggtatctggtaatgctgagatcttcggcacggagcttcctcctgaaatatgg ctcaccttaccaccgaggctgaaaattgccgttttcacttggtatggagccacgcttgaa atggatggtgcaactgaaactgattatacggcagatgagacacccatgattggttatgtg aatgcccatgccatacttgaaggaagaagaagccgtgctagagcatcatcatctgatgac tctggttctactcagggtccacgggtaattgttgtggggcctactgactcaggtaagagc accttgtctaggatgcttcttagttgggctgcaaaacagggttggaagcctacatttgtg gacttggatattggccaaggatctataacaattcctggatgcattgctgctacccctatt gagttgcccattgatcccgttgatggaatcccacttgaaatgcccctggtgtacttttat ggacacactactccaagcaataatgttgatctgtacaaagtgcttgtgaaggagcttgcc gaagtgctggagaggcaatttactggcaatgcagaatctcgagctgctggtatggttatc aacacaatgggatggattgagggtattggctatgagctgcttctacatgcaattgacacg ctgaatgccaatgtagtcttggttttgggtcaggagaaactttggagcatgcttaaagat gtactaaagaacaagcctaatgtggatgttgtaaaactccaaaagtcaggtggtgttgta tccagaaatgccaaatttcgtcaaaaggccaggagttacagaataagggaatatttttat ggccctgcaaatgatttctcaccacactccaacattgcaaactttaacgatctattcatt tatcgcattggcggtggacctcaggcacctcgttcggcactacctattggtgcagaacct gctgcagaccccacaagattagtgcctgtcaacattaatcgagatttgctccatttggtt cttgctgtttcatttgccaaagaacctgatgaaattatgtcaagcaatgttgctggattt gtgtatgttactgacattgacatccaaaggaagaaacttacatatcttgcgccatcggca ggggaacttccaggcaaatatttgattatgggaactttgacctggcttgagacctga

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